Gene: Aco000044 (Ananas comosus)

Overview top

Gene Identifier
Aco000044
Transcript Identifier
Aco000044.1
Gene Type
Coding gene
Location
LG12 : 5259133-5276020 : positive

Family Information

Homologous gene family
HOM04x5M001747
(137 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M002018
(123 genes in 39 species)
specific family

Descriptions

Description
DNA LIGASE 6

Identifiers

Type Value
idAco000044.v3
pacid33042708
tidAco000044.1.v3
tidAco000044.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
InterProDNA recombination
GO:0051103
IEA
InterProDNA ligation involved in DNA repair
GO:0071897
ISO
PLAZA Homology (enrichment)DNA biosynthetic process HOM05M001747
GO:0006303
ISO
PLAZA Integrative Orthologydouble-strand break repair via nonhomologous end joining AT1G66730
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT1G66730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003910
IEA
InterProDNA ligase (ATP) activity
GO:0005524
IEA
InterProATP binding
GO:0003909
IEA
InterProDNA ligase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR036599DNA ligase, ATP-dependent, N-terminal domain superfamily
IPR011084DNA repair metallo-beta-lactamase
IPR012310DNA ligase, ATP-dependent, central
IPR012308DNA ligase, ATP-dependent, N-terminal
IPR016059DNA ligase, ATP-dependent, conserved site
IPR001279Metallo-beta-lactamase

Mapman id Description
50.6.5Enzyme classification.EC_6 ligases.EC_6.5 ligase forming phosphoric ester bond