Vitis vinifera

Vitis vinifera, the grapevine, has been used to produce wine for thousands of years. This was the fourth genome of a flowering plant produced, selected because of it's importance in food production. Also vitis lacks any recent genome doublings; it resembles a more ancestral state of the genome and revealed some major insights in the evolution of Angiosperms.
Publication:
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
Info and Links
Source | JGI 12xMarch2010 |
PLAZA identifier | vvi |
NCBI link | Vitis vinifera |
Mitochondrion | Not available |
Chloroplast | Not available |
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Annotations
Page 1 of 1318, showing 20 records out of 26346 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
GSVIVG01017397001 | GSVIVT01017397001 | 7893346 | 7895155 | + | chr9 | coding | HOM04x5M003017 | ORTHO04x5M003553 |
GSVIVG01029462001 | GSVIVT01029462001 | 22579545 | 22596265 | - | chr9 | coding | HOM04x5M000002 | ORTHO04x5M000656 |
GSVIVG01029506001 | GSVIVT01029506001 | 22202717 | 22202951 | + | chr9 | coding | Orphan Gene | Orphan Gene |
GSVIVG01017556001 | GSVIVT01017556001 | 10510928 | 10514598 | - | chr9 | coding | HOM04x5M000677 | ORTHO04x5M000552 |
GSVIVG01017089001 | GSVIVT01017089001 | 4089906 | 4093433 | - | chr9 | coding | HOM04x5M000147 | ORTHO04x5M001049 |
GSVIVG01017561001 | GSVIVT01017561001 | 10565805 | 10567978 | - | chr9 | coding | HOM04x5M000129 | Orphan Gene |
GSVIVG01016104001 | GSVIVT01016104001 | 19021883 | 19038306 | + | chr9 | coding | HOM04x5M000223 | ORTHO04x5M003265 |
GSVIVG01017327001 | GSVIVT01017327001 | 6760553 | 6761117 | + | chr9 | coding | HOM04x5M000311 | ORTHO04x5M000237 |
GSVIVG01017146001 | GSVIVT01017146001 | 4632649 | 4635980 | + | chr9 | coding | HOM04x5M000116 | ORTHO04x5M000112 |
GSVIVG01029639001 | GSVIVT01029639001 | 20310330 | 20310536 | - | chr9 | coding | HOM04x5M001587 | ORTHO04x5M001489 |
GSVIVG01029457001 | GSVIVT01029457001 | 22645064 | 22648605 | + | chr9 | coding | Orphan Gene | Orphan Gene |
GSVIVG01016837001 | GSVIVT01016837001 | 1789960 | 1791952 | + | chr9 | coding | HOM04x5M012799 | ORTHO04x5M011513 |
GSVIVG01016879001 | GSVIVT01016879001 | 2205746 | 2224787 | + | chr9 | coding | HOM04x5M000119 | ORTHO04x5M000176 |
GSVIVG01016926001 | GSVIVT01016926001 | 2652219 | 2656658 | + | chr9 | coding | HOM04x5M000097 | Orphan Gene |
GSVIVG01017009001 | GSVIVT01017009001 | 3412001 | 3414338 | + | chr9 | coding | HOM04x5M000350 | ORTHO04x5M000238 |
GSVIVG01016136001 | GSVIVT01016136001 | 19568967 | 19578706 | + | chr9 | coding | HOM04x5M008749 | ORTHO04x5M011031 |
GSVIVG01017052001 | GSVIVT01017052001 | 3805502 | 3808898 | + | chr9 | coding | HOM04x5M000016 | ORTHO04x5M000010 |
GSVIVG01017488001 | GSVIVT01017488001 | 9306296 | 9316133 | + | chr9 | coding | Orphan Gene | Orphan Gene |
GSVIVG01017489001 | GSVIVT01017489001 | 9343207 | 9344361 | + | chr9 | coding | HOM04x5M000776 | ORTHO04x5M005444 |
GSVIVG01029587001 | GSVIVT01029587001 | 21076318 | 21079858 | + | chr9 | coding | HOM04x5M031311 | Orphan Gene |