Amborella trichopoda

Amborella trichopoda is strongly supported as the single living species of the sister lineage to all other extant flowering plants, providing a unique reference for inferring the genome content and structure of the most recent common ancestor (MRCA) of living angiosperms.
Publication:
The Amborella Genome and the Evolution of Flowering Plants.
Info and Links
Source | JGI v1.0 |
PLAZA identifier | atr |
NCBI link | Amborella trichopoda |
Mitochondrion | Not available |
Chloroplast | Not available |
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Annotations
Page 1 of 1343, showing 20 records out of 26846 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
ATR0001G001 | ATR0001G001.1 | 1414805 | 1415131 | + | AmTr_v1.0_scaffold00133 | coding | Orphan Gene | Orphan Gene |
ATR0001G002 | ATR0001G002.1 | 448004 | 448354 | + | AmTr_v1.0_scaffold00133 | coding | Orphan Gene | Orphan Gene |
ATR0001G003 | ATR0001G003.1 | 1125523 | 1161838 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M003955 | ORTHO04x5M004601 |
ATR0001G004 | ATR0001G004.1 | 890510 | 939452 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M001103 | ORTHO04x5M000898 |
ATR0001G005 | ATR0001G005.1 | 756994 | 757517 | + | AmTr_v1.0_scaffold00133 | coding | Orphan Gene | Orphan Gene |
ATR0001G006 | ATR0001G006.1 | 1169176 | 1169727 | + | AmTr_v1.0_scaffold00133 | coding | Orphan Gene | Orphan Gene |
ATR0001G007 | ATR0001G007.1 | 1350174 | 1351185 | - | AmTr_v1.0_scaffold00133 | coding | HOM04x5M001381 | ORTHO04x5M001779 |
ATR0001G008 | ATR0001G008.1 | 81548 | 119449 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M002737 | ORTHO04x5M003042 |
ATR0001G009 | ATR0001G009.1 | 1239836 | 1256850 | - | AmTr_v1.0_scaffold00133 | coding | HOM04x5M000025 | ORTHO04x5M000892 |
ATR0001G010 | ATR0001G010.1 | 1418651 | 1443926 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M002219 | ORTHO04x5M002859 |
ATR0001G011 | ATR0001G011.1 | 1371917 | 1411138 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M007051 | ORTHO04x5M007367 |
ATR0001G012 | ATR0001G012.1 | 244634 | 245314 | - | AmTr_v1.0_scaffold00133 | coding | Orphan Gene | Orphan Gene |
ATR0001G013 | ATR0001G013.1 | 824086 | 824736 | - | AmTr_v1.0_scaffold00133 | coding | HOM04x5M000009 | ORTHO04x5M000005 |
ATR0001G014 | ATR0001G014.1 | 1456522 | 1457855 | - | AmTr_v1.0_scaffold00133 | coding | HOM04x5M006189 | ORTHO04x5M007933 |
ATR0001G015 | ATR0001G015.1 | 369944 | 371387 | - | AmTr_v1.0_scaffold00133 | coding | HOM04x5M006608 | ORTHO04x5M008489 |
ATR0001G016 | ATR0001G016.1 | 412569 | 420939 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M000074 | ORTHO04x5M000143 |
ATR0001G017 | ATR0001G017.1 | 1173301 | 1175053 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M000836 | ORTHO04x5M001790 |
ATR0001G018 | ATR0001G018.1 | 1290935 | 1313216 | + | AmTr_v1.0_scaffold00133 | coding | HOM04x5M000111 | ORTHO04x5M000580 |
ATR0001G019 | ATR0001G019.1 | 446240 | 446737 | - | AmTr_v1.0_scaffold00133 | coding | HOM04x5M000286 | ORTHO04x5M000330 |
ATR0001G020 | ATR0001G020.1 | 675361 | 675798 | - | AmTr_v1.0_scaffold00133 | coding | Orphan Gene | Orphan Gene |