Solanum lycopersicum

Solanum lycopersicum, tomato, is a valuable genome for several reasons. Tomatoes are of significant agricultural importance and the genome sequence can assist breeders in developing varieties with better flavor, resistance and shelf-life. But also for evolutionary studies the solanaceae are of interest as they branched of other dicots earlier than grapevine.
Publication:
The tomato genome sequence provides insights into fleshy fruit evolution.
Info and Links
Source | Sol Genomics itag2.4 |
PLAZA identifier | sly |
NCBI link | Solanum lycopersicum |
Mitochondrion | Not available |
Chloroplast | Not available |
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Annotations
Page 1 of 1737, showing 20 records out of 34725 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
Solyc08g005270.2 | Solyc08g005270.2.1 | 192839 | 198007 | - | SL2.50ch08 | coding | HOM04x5M000807 | ORTHO04x5M003246 |
Solyc08g029220.1 | Solyc08g029220.1.1 | 37438014 | 37440383 | + | SL2.50ch08 | coding | HOM04x5M000221 | ORTHO04x5M000721 |
Solyc08g078730.2 | Solyc08g078730.2.1 | 62477455 | 62479008 | - | SL2.50ch08 | coding | HOM04x5M006445 | ORTHO04x5M006350 |
Solyc08g042040.2 | Solyc08g042040.2.1 | 24113760 | 24116069 | - | SL2.50ch08 | coding | HOM04x5M021675 | ORTHO04x5M027789 |
Solyc08g016650.1 | Solyc08g016650.1.1 | 8347767 | 8348023 | + | SL2.50ch08 | coding | Orphan Gene | Orphan Gene |
Solyc08g075340.2 | Solyc08g075340.2.1 | 59466920 | 59477091 | + | SL2.50ch08 | coding | HOM04x5M003594 | ORTHO04x5M004517 |
Solyc08g082740.2 | Solyc08g082740.2.1 | 65430721 | 65437237 | - | SL2.50ch08 | coding | HOM04x5M003490 | ORTHO04x5M004354 |
Solyc08g077850.1 | Solyc08g077850.1.1 | 61748158 | 61777344 | + | SL2.50ch08 | coding | HOM04x5M004011 | ORTHO04x5M004635 |
Solyc08g081340.2 | Solyc08g081340.2.1 | 64398279 | 64407679 | + | SL2.50ch08 | coding | HOM04x5M004304 | ORTHO04x5M006371 |
Solyc08g008170.2 | Solyc08g008170.2.1 | 2638232 | 2642455 | - | SL2.50ch08 | coding | HOM04x5M000042 | ORTHO04x5M000107 |
Solyc08g005980.2 | Solyc08g005980.2.1 | 749718 | 754895 | + | SL2.50ch08 | coding | HOM04x5M003030 | ORTHO04x5M003516 |
Solyc08g077040.2 | Solyc08g077040.2.1 | 60982430 | 60986024 | + | SL2.50ch08 | coding | HOM04x5M006213 | ORTHO04x5M007343 |
Solyc08g068030.1 | Solyc08g068030.1.1 | 57119602 | 57120042 | - | SL2.50ch08 | coding | HOM04x5M002258 | ORTHO04x5M011514 |
Solyc08g082670.2 | Solyc08g082670.2.1 | 65381404 | 65386130 | + | SL2.50ch08 | coding | HOM04x5M000073 | ORTHO04x5M000642 |
Solyc08g068960.2 | Solyc08g068960.2.1 | 58033196 | 58040190 | + | SL2.50ch08 | coding | HOM04x5M000321 | ORTHO04x5M003529 |
Solyc08g065590.1 | Solyc08g065590.1.1 | 53732137 | 53735679 | + | SL2.50ch08 | coding | HOM04x5M000935 | ORTHO04x5M000836 |
Solyc08g077460.2 | Solyc08g077460.2.1 | 61379715 | 61381287 | - | SL2.50ch08 | coding | HOM04x5M000389 | ORTHO04x5M002318 |
Solyc08g029190.2 | Solyc08g029190.2.1 | 37974714 | 37976821 | - | SL2.50ch08 | coding | HOM04x5M001358 | ORTHO04x5M001352 |
Solyc08g066080.1 | Solyc08g066080.1.1 | 54522656 | 54523661 | + | SL2.50ch08 | coding | HOM04x5M000777 | Orphan Gene |
Solyc08g008200.1 | Solyc08g008200.1.1 | 2658313 | 2661038 | - | SL2.50ch08 | coding | HOM04x5M000180 | ORTHO04x5M000134 |