Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11740 Brassica napus
A04p23900 Brassica napus
A05p07320 Brassica napus
A05p07330 Brassica napus
A07p26500 Brassica napus
A07p45430 Brassica napus
A09p26790 Brassica napus
Aa31LG3G3350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1410 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.189 Anthoceros agrestis
Actinidia15757 Actinidia chinensis
Actinidia15979 Actinidia chinensis
Actinidia15980 Actinidia chinensis
Ah.01g020550 Amaranthus hybridus
AL2G41470 Arabidopsis lyrata
AL7G10650 Arabidopsis lyrata
AL7G40190 Arabidopsis lyrata
Aqoxy180s004 Aquilegia oxysepala
Aqoxy180s005 Aquilegia oxysepala
Aqoxy180s006 Aquilegia oxysepala
Aqoxy180s007 Aquilegia oxysepala
Aqoxy180s008 Aquilegia oxysepala
Aqoxy3G02657 Aquilegia oxysepala
Aqoxy3G03781 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8VY1P5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7D93H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DCJ864 Arachis hypogaea
AT1G80070 Arabidopsis thaliana
AT4G38780 Arabidopsis thaliana
ATR0800G142 Amborella trichopoda
Atru.chr1.2928 Acer truncatum
AUR62011512 Chenopodium quinoa
AUR62016331 Chenopodium quinoa
BcaB02g09158 Brassica carinata
BcaB02g09159 Brassica carinata
BcaB02g09160 Brassica carinata
BcaB03g16327 Brassica carinata
BcaB06g28420 Brassica carinata
BcaB06g28506 Brassica carinata
BcaC02g12020 Brassica carinata
BcaC02g12021 Brassica carinata
BcaC05g27955 Brassica carinata
BcaC08g47569 Brassica carinata
BcaC09g51361 Brassica carinata
BcaNung01746 Brassica carinata
BolC1t01360H Brassica oleracea
BolC4t22469H Brassica oleracea
BolC4t22470H Brassica oleracea
BolC4t27552H Brassica oleracea
BolC5t32699H Brassica oleracea
BolC5t32700H Brassica oleracea
BolC6t40439H Brassica oleracea
BolC8t47393H Brassica oleracea
BolC8t47394H Brassica oleracea
BraA01t01116Z Brassica rapa
BraA04t17913Z Brassica rapa
BraA05t19697Z Brassica rapa
BraA05t19698Z Brassica rapa
BraA07t30293Z Brassica rapa
BraA07t32047Z Brassica rapa
BraA09t38251Z Brassica rapa
C01p13930 Brassica napus
C04p08770 Brassica napus
C04p08780 Brassica napus
C04p60530 Brassica napus
C04p60540 Brassica napus
C04p60600 Brassica napus
C05p39580 Brassica napus
C05p39590 Brassica napus
C05p39600 Brassica napus
C06p54260 Brassica napus
C08p06140 Brassica napus
C08p06150 Brassica napus
CAN.G147.16 Capsicum annuum
CAN.G2186.1 Capsicum annuum
CAN.G32.13 Capsicum annuum
CANSAT56G2164 Cannabis sativa
CARHR074430 Cardamine hirsuta
CARHR111690 Cardamine hirsuta
CARHR151090 Cardamine hirsuta
CARHR222110 Cardamine hirsuta
CARHR222120 Cardamine hirsuta
Carub.0002s2745 Capsella rubella
Carub.0007s2658 Capsella rubella
Carub.0007s2659 Capsella rubella
Ca_01053_v3 Cicer arietinum L.
Ca_14895_v3 Cicer arietinum L.
Ca_25291_v3 Cicer arietinum L.
Ca_25295_v3 Cicer arietinum L.
CBR_g48660 Chara braunii
Cc00_g08660 Coffea canephora
Cc01_g01870 Coffea canephora
Cc09_g00370 Coffea canephora
CDE02G0999 Ceratophyllum demersum
CDE02G3147 Ceratophyllum demersum
CDE09G0407 Ceratophyllum demersum
Cfa001956 Carpinus fangiana
Cfa023699 Carpinus fangiana
Ciclev10024683m.g Citrus clementina
CiPaw.01G248600 Carya illinoinensis
CiPaw.02G157600 Carya illinoinensis
ClCG09G002950 Citrullus lanatus
COL.COLO4_00260 Corchorus olitorius
COL.COLO4_11939 Corchorus olitorius
COL.COLO4_11940 Corchorus olitorius
COL.COLO4_23572 Corchorus olitorius
COL.COLO4_23573 Corchorus olitorius
COL.COLO4_24410 Corchorus olitorius
COL.COLO4_26864 Corchorus olitorius
Cpa.g.sc67.48 Carica papaya
Cpa.g.sc67.49 Carica papaya
Cre01.g016050 Chlamydomonas reinhardtii
CsaV3_7G032320 Cucumis sativus L.
CSS0044190 Camellia sinensis var. sinensis
DCAR_022311 Daucus carota
DCAR_025515 Daucus carota
Dinv30609 Davidia involucrata
Dinv30610 Davidia involucrata
Dinv38126 Davidia involucrata
Duzib160G0553 Durio zibethinus
Duzib235G1417 Durio zibethinus
ECA246G5065 Erigeron canadensis
ECA247G2936 Erigeron canadensis
EL10Ac9g21877 Beta vulgaris
Eucgr.F03879 Eucalyptus grandis
Eucgr.F03935 Eucalyptus grandis
FAN02G2239 Fragaria x ananassa
FAN02G2298 Fragaria x ananassa
FAN05G0659 Fragaria x ananassa
FAN05G2070 Fragaria x ananassa
FAN05G3102 Fragaria x ananassa
FAN05G3465 Fragaria x ananassa
FAN05G4314 Fragaria x ananassa
FAN05G4711 Fragaria x ananassa
FAN09G0817 Fragaria x ananassa
FAN09G2021 Fragaria x ananassa
FAN09G3038 Fragaria x ananassa
FAN09G4315 Fragaria x ananassa
FAN09G4661 Fragaria x ananassa
FAN14G1989 Fragaria x ananassa
FAN14G4930 Fragaria x ananassa
FvH4_6g29610 Fragaria vesca
FvH4_6g43880 Fragaria vesca
Glyma.13G366100 Glycine max
Glyma.15G007100 Glycine max
Gohir.A05G122750 Gossypium hirsutum
Gohir.A05G122801 Gossypium hirsutum
Gohir.A05G122851 Gossypium hirsutum
Gohir.A10G073101 Gossypium hirsutum
Gohir.D05G123700 Gossypium hirsutum
Gohir.D10G077825 Gossypium hirsutum
Gohir.D10G077850 Gossypium hirsutum
Gorai.009G127700 Gossypium raimondii
Gorai.011G084400 Gossypium raimondii
GSVIVG01017346001 Vitis vinifera
HanXRQChr01g0005041 Helianthus annuus
HanXRQChr02g0033481 Helianthus annuus
HanXRQChr04g0097891 Helianthus annuus
HanXRQChr16g0508791 Helianthus annuus
HanXRQChr16g0508801 Helianthus annuus
HanXRQChr16g0508811 Helianthus annuus
HanXRQChr16g0508821 Helianthus annuus
HanXRQChr16g0508831 Helianthus annuus
Haze_16566 Corylus avellana
Haze_26409 Corylus avellana
Hma1.2p1_0017F.1_g011180 Hydrangea macrophylla
HPP92_003044 Vanilla planifolia
Hund00514 Selenicereus undatus
Lalb_Chr04g0249401 Lupinus albus
Lalb_Chr14g0373851 Lupinus albus
Lalb_Chr24g0395471 Lupinus albus
Lj3g0016754 Lotus japonicus
Lj9C499G5 Lonicera japonica
Lsat_1_v5_gn_1_34320 Lactuca sativa
Manes.04G112400 Manihot esculenta
Manes.11G057400 Manihot esculenta
Mapoly0019s0008 Marchantia polymorpha
MCO02G483 Micromonas commoda
MD00G1072300 Malus domestica
MD09G1102200 Malus domestica
MD09G1102300 Malus domestica
MD09G1102400 Malus domestica
MD09G1127100 Malus domestica
MD09G1127200 Malus domestica
MD09G1127300 Malus domestica
MD09G1127400 Malus domestica
MD17G1212800 Malus domestica
Medtr1g060060 Medicago truncatula
Medtr1g060100 Medicago truncatula
Medtr2g093510 Medicago truncatula
Medtr2g103960 Medicago truncatula
Medtr5g098100 Medicago truncatula
Medtr8g010730 Medicago truncatula
Medtr8g011150 Medicago truncatula
MELO3C023427.2 Cucumis melo
MELO3C027212.2 Cucumis melo
Migut.D01080 Erythranthe guttata
MSTRG.4705 Avicennia marina
MSTRG.9422 Avicennia marina
Nitab4.5_0000366g0200 Nicotiana tabacum
Nitab4.5_0001200g0150 Nicotiana tabacum
Nitab4.5_0002890g0050 Nicotiana tabacum
Nitab4.5_0007065g0030 Nicotiana tabacum
Nn1g03536 Nelumbo nucifera
Nn1g03537 Nelumbo nucifera
Nn2g12097 Nelumbo nucifera
Nn6g34947 Nelumbo nucifera
Nn7g37322 Nelumbo nucifera
Nn8g39518 Nelumbo nucifera
Nn8g40737 Nelumbo nucifera
Oeu005942.1 Olea europaea
Oeu045135.1 Olea europaea
Os05g0163250 Oryza sativa ssp. japonica
Os06g0167000 Oryza sativa ssp. japonica
Peaxi162Scf00089g00635 Petunia axillaris
Peaxi162Scf00128g01033 Petunia axillaris
Peaxi162Scf01838g00019 Petunia axillaris
PGR102G3099 Punica granatum
PGSC0003DMG400028736 Solanum tuberosum
Phvul.004G096300 Phaseolus vulgaris
Phvul.005G086200 Phaseolus vulgaris
Phvul.005G178600 Phaseolus vulgaris
Potri.003G031900 Populus trichocarpa
Pp3c24_20910 Physcomitrium patens
Pp3c8_25090 Physcomitrium patens
PRCOL_00001855 Prasinoderma coloniale
Prupe.3G088200 Prunus persica
Prupe.3G223400 Prunus persica
Prupe.7G079800 Prunus persica
Psat5g259320 Pisum sativum
Psat5g302520 Pisum sativum
PSO017G1385 Papaver somniferum
PSO170G3007 Papaver somniferum
PSO455G0134 Papaver somniferum
PSO455G0191 Papaver somniferum
PSO455G0257 Papaver somniferum
PSO455G0285 Papaver somniferum
QL05p031390 Quercus lobata
RcHm_v2.0_Chr2g0122691 Rosa chinensis
RcHm_v2.0_Chr2g0135211 Rosa chinensis
RcHm_v2.0_Chr2g0160631 Rosa chinensis
Rhsim08G0212600 Rhododendron simsii
Sabra03G0018200 Salix brachista
SalBow6G3017 Salvia bowleyana
SalBow6G5900 Salvia bowleyana
Sc10g0008090 Simmondsia chinensis
Sed0003553 Sechium edule
Sed0021407 Sechium edule
SEGI_03160 Sequoiadendron giganteum
SEGI_15815 Sequoiadendron giganteum
SGA_v2.0_scaffold26G11346 Striga asiatica
SGA_v2.0_scaffold332G48966 Striga asiatica
SGA_v2.0_scaffold332G48967 Striga asiatica
SHI11229 Sapria himalayana
SMO145G0262 Selaginella moellendorffii
Solyc06g043160.1 Solanum lycopersicum
Solyc07g008880.3 Solanum lycopersicum
Sopen07g004810 Solanum pennellii
Sp5g35830 Schrenkiella parvula
TAR383G0612 Trochodendron aralioides
TAR383G0801 Trochodendron aralioides
TAR625G0212 Trochodendron aralioides
TAR626G1692 Trochodendron aralioides
THA.LOC104800410 Tarenaya hassleriana
THA.LOC104812513 Tarenaya hassleriana
Thecc.06G025500 Theobroma cacao
Thhalv10017992m.g Eutrema salsugineum
Thhalv10024184m.g Eutrema salsugineum
Thhalv10025834m.g Eutrema salsugineum
TPR.G22695 Trifolium pratense
TPR.G24585 Trifolium pratense
TPR.G37161 Trifolium pratense
TPR.G7701 Trifolium pratense
TWI75G1620 Tripterygium wilfordii
unitig_747.g21298 Utricularia gibba
unitig_747.g21299 Utricularia gibba
unitig_747.g21300 Utricularia gibba
vmacro02726 Vaccinium macrocarpon
vmacro07672 Vaccinium macrocarpon
vmacro07673 Vaccinium macrocarpon
vmacro12874 Vaccinium macrocarpon
vmacro19000 Vaccinium macrocarpon
vmacro20455 Vaccinium macrocarpon
vmacro22767 Vaccinium macrocarpon
vmacro22816 Vaccinium macrocarpon
VMungo1080G1733 Vigna mungo
Zm00001eb271550 Zea mays
Zm00001eb337780 Zea mays
Zm00001eb355640 Zea mays
Zm00001eb375530 Zea mays

User provided reference genes

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