Gene: Lalb_Chr04g0249401

General Information

Structural Information

  • Species Lupinus albus
  • Gene Identifier Lalb_Chr04g0249401
  • Transcript Identifier Lalb_Chr04g0249401
  • Gene Type Coding gene
  • Location Lalb_Chr04 : 1345543-1347215 : negative

Gene Family Information

  • ID HOM05D002341
  • #Genes/#Species 290/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lalb_Chr04g0249401.v1
  • pacid 44551356
  • uniprot A0A6A4QPJ3

Descriptions

  • Description PF12134 - PRP8 domain IV core (PRP8_domainIV)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030623
ISO
PLAZA Homology (enrichment)U5 snRNA binding HOM05D002341
GO:0017070
ISO
PLAZA Homology (enrichment)U6 snRNA binding HOM05D002341
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D002341
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D002341
GO:0070122
ISO
PLAZA Homology (enrichment)isopeptidase activity HOM05D002341
GO:0008237
ISO
PLAZA Homology (enrichment)metallopeptidase activity HOM05D002341

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027652 Pre-mRNA-processing-splicing factor 8
IPR012337 Ribonuclease H-like superfamily
IPR021983 PRP8 domain IV core
IPR043172 Prp8 RNase domain IV, palm region
IPR043173 Prp8 RNase domain IV, fingers region
Mapman id Description
35.1 not assigned.annotated