Gene: Carub.0007s2658

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s2658
  • Transcript Identifier Carub.0007s2658.1
  • Gene Type Coding gene
  • Location scaffold_7 : 10092750-10093628 : positive

Gene Family Information

  • ID HOM05D002341
  • #Genes/#Species 290/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s2658.v1.1
  • pacid 39235245

Descriptions

  • Description PTHR11140//PTHR11140:SF0 - PRE-MRNA SPLICING FACTOR PRP8 // PRE-MRNA-PROCESSING-SPLICING FACTOR 8
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030623
ISO
PLAZA Homology (enrichment)U5 snRNA binding HOM05D002341
GO:0017070
ISO
PLAZA Homology (enrichment)U6 snRNA binding HOM05D002341
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D002341
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D002341
GO:0070122
ISO
PLAZA Homology (enrichment)isopeptidase activity HOM05D002341
GO:0008237
ISO
PLAZA Homology (enrichment)metallopeptidase activity HOM05D002341

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012591 PRO8NT domain
IPR027652 Pre-mRNA-processing-splicing factor 8
Mapman id Description
35.1 not assigned.annotated