Gene: Thhalv10025834m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10025834m.g
  • Transcript Identifier Thhalv10025834m
  • Gene Type Coding gene
  • Location scaffold_1 : 10076497-10077409 : negative

Gene Family Information

  • ID HOM05D002341
  • #Genes/#Species 290/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10025834m.g.v1.0
  • pacid 20195252

Descriptions

  • Description K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030623
ISO
PLAZA Homology (enrichment)U5 snRNA binding HOM05D002341
GO:0017070
ISO
PLAZA Homology (enrichment)U6 snRNA binding HOM05D002341
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D002341
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D002341
GO:0070122
ISO
PLAZA Homology (enrichment)isopeptidase activity HOM05D002341
GO:0008237
ISO
PLAZA Homology (enrichment)metallopeptidase activity HOM05D002341

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021983 PRP8 domain IV core
IPR027652 Pre-mRNA-processing-splicing factor 8
IPR043173 Prp8 RNase domain IV, fingers region
IPR043172 Prp8 RNase domain IV, palm region
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated