Gene: unitig_747.g21298

General Information

Structural Information

Species Utricularia gibba
Gene Identifier unitig_747.g21298
Transcript Identifier unitig_747.g21298.t1
Gene Type Coding gene
Location unitig_747 : 501053-504688 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002341
#Genes/#Species 290/99
Phylogenetic origin

ID ORTHO05D003165
#Genes/#Species 240/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid unitig_747.g21298.t1

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0000380	ISO	PLAZA Integrative Orthology	alternative mRNA splicing, via spliceosome	AT1G80070

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008237	IEA	InterPro	metallopeptidase activity
GO:0070122	IEA	InterPro	isopeptidase activity
GO:0017070	IEA	InterPro	U6 snRNA binding
GO:0030623	ISO	PLAZA Homology (enrichment)	U5 snRNA binding	HOM05D002341
GO:0003723	ISO	PLAZA Homology (enrichment)	RNA binding	HOM05D002341
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT4G38780

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005681	IEA	InterPro	spliceosomal complex
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT4G38780

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR021983	PRP8 domain IV core
IPR043172	Prp8 RNase domain IV, palm region
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain
IPR012984	PROCT domain
IPR043173	Prp8 RNase domain IV, fingers region
IPR019580	Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR027652	Pre-mRNA-processing-splicing factor 8
IPR012337	Ribonuclease H-like superfamily

Mapman id	Description
16.2.1.4.4	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF8/SUS2)