Gene: TPR.G7701

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G7701
  • Transcript Identifier TPR.T7966
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_3775 : 1530-3171 : negative

Gene Family Information

  • ID HOM05D002341
  • #Genes/#Species 290/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA7966.v2
  • id Tp57577_TGAC_v2_gene7701.v2
  • pacid 35952820

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity
GO:0030623
ISO
PLAZA Homology (enrichment)U5 snRNA binding HOM05D002341
GO:0017070
ISO
PLAZA Homology (enrichment)U6 snRNA binding HOM05D002341
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D002341

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012337 Ribonuclease H-like superfamily
IPR043173 Prp8 RNase domain IV, fingers region
IPR012984 PROCT domain
IPR027652 Pre-mRNA-processing-splicing factor 8
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
Mapman id Description
35.1 not assigned.annotated