Gene: Cc09_g00370

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc09_g00370
  • Transcript Identifier Cc09_g00370.1
  • Gene Type Coding gene
  • Location chr9 : 251856-252065 : negative

Gene Family Information

  • ID HOM05D002341
  • #Genes/#Species 290/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB O14187
  • UniProtKB B8BVU2
  • UniProtKB P34369
  • UniProtKB A8HPL0
  • UniProtKB Q6P2Q9
  • UniProtKB F2DH98
  • id GSCOCG00017958001

Descriptions

  • Description Pre-mRNA-splicing factor 8 homolog
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030623
ISO
PLAZA Homology (enrichment)U5 snRNA binding HOM05D002341
GO:0017070
ISO
PLAZA Homology (enrichment)U6 snRNA binding HOM05D002341
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D002341
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D002341
GO:0070122
ISO
PLAZA Homology (enrichment)isopeptidase activity HOM05D002341
GO:0008237
ISO
PLAZA Homology (enrichment)metallopeptidase activity HOM05D002341

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027652 Pre-mRNA-processing-splicing factor 8
IPR043172 Prp8 RNase domain IV, palm region
IPR021983 PRP8 domain IV core
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.2 not assigned.not annotate