Gene: BcaB02g09159

General Information

Structural Information

  • Species Brassica carinata
  • Gene Identifier BcaB02g09159
  • Transcript Identifier BcaB02g09159
  • Gene Type Coding gene
  • Location ChrB02 : 18894282-18895651 : negative

Gene Family Information

  • ID HOM05D002341
  • #Genes/#Species 290/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IEA
InterProDNA binding
GO:0030623
ISO
PLAZA Homology (enrichment)U5 snRNA binding HOM05D002341
GO:0017070
ISO
PLAZA Homology (enrichment)U6 snRNA binding HOM05D002341
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D002341
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D002341
GO:0070122
ISO
PLAZA Homology (enrichment)isopeptidase activity HOM05D002341
GO:0008237
ISO
PLAZA Homology (enrichment)metallopeptidase activity HOM05D002341

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR021983 PRP8 domain IV core
IPR043172 Prp8 RNase domain IV, palm region
IPR043173 Prp8 RNase domain IV, fingers region
IPR002119 Histone H2A
IPR012337 Ribonuclease H-like superfamily
IPR027652 Pre-mRNA-processing-splicing factor 8
Mapman id Description
12.1.1.1 Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A)