Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
VV14G10540
(Vitis vinifera)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Vitis vinifera | Orthologous gene family | VV14G10540 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | VV14G10540 | 1 | ||
| Tree-based ortholog | VV14G10540 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00045G01640 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00045G01640 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G32840 | 1 | |
| Anchor point | N/A | AL6G26780 AL1G09260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G09260 | 1 | ||
| Tree-based ortholog | 1-to-1 | AL1G09260 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G35840 | 1 | |
| Anchor point | N/A | AT1G09570 AT5G26710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G09570 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT1G09570 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G06620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G07240 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV6G07240 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G15840 | 1 | |
| Anchor point | N/A | BR06G06020 BR09G03600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G06020 | 1 | ||
| Tree-based ortholog | 1-to-many | BR06G06020 BR09G51140 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G30310 | 1 | |
| Anchor point | N/A | CRU_006G23530 CRU_001G08490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G08490 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_001G08490 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G02300 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00048G02300 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G02200 | 1 | |
| Tree-based ortholog | 1-to-many | CR14G01560 CR11G00260 | 2 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G07420 | 1 | |
| Anchor point | N/A | CL03G17600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G08880 | 1 | ||
| Tree-based ortholog | 1-to-many | CL08G08880 CL08G08910 | 2 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00859G00040 | 1 | |
| Anchor point | N/A | CS00102G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00102G00140 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00102G00140 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00001G08280 | 1 | |
| Anchor point | N/A | CM00025G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00096G00060 | 1 | ||
| Tree-based ortholog | 1-to-many | CM00096G00060 CM00096G00100 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G30340 | 1 | |
| Anchor point | N/A | EG0008G11630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G11170 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0002G11170 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G32650 | 1 | |
| Anchor point | N/A | FV6G03420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G03420 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G03420 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM09G11600 | 1 | |
| Anchor point | N/A | GM19G41210 GM03G38620 GM10G28170 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G22160 GM10G28170 | 2 | ||
| Tree-based ortholog | 1-to-many | GM03G38620 GM19G41210 GM20G22160 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G16630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G20390 | 1 | ||
| Tree-based ortholog | 1-to-many | GR07G29280 GR13G20390 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ6G014350 | 1 | |
| Anchor point | N/A | LJ5G026430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G026440 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ5G026440 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G370950 MD05G006510 MD10G021310 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G014900 MD00G085940 | 2 | ||
| Tree-based ortholog | 1-to-many | MD04G014900 MD00G085940 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME10434G00010 | 1 | |
| Anchor point | N/A | ME02264G00680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02264G00680 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME02264G00680 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G049520 | 1 | |
| Anchor point | N/A | MT1G085150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G085160 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT1G085160 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G54084 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G51030 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS03G51030 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G02040 | 1 | |
| Tree-based ortholog | 1-to-many | OL01G01660 OL01G04480 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00081G00760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00164G00330 PP00047G00170 PP00233G00100 ... | 7 | ||
| Tree-based ortholog | 1-to-many | PP00233G00100 PP00081G00760 PP00091G00620 ... | 8 | ||
| Populus trichocarpa | Anchor point | N/A | PT13G00030 PT05G00120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G00030 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT13G00030 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G17980 | 1 | |
| Anchor point | N/A | PPE_006G30850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G30850 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_006G30850 | 1 | ||
| Ricinus communis | Anchor point | N/A | RC30128G03830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G03840 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30128G03840 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL07G045480 | 1 | |
| Anchor point | N/A | SL01G102410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G044670 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL10G044670 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST07G017280 | 1 | |
| Anchor point | N/A | ST01G039330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G011220 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST10G011220 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G06270 | 1 | |
| Anchor point | N/A | TP1G08170 TP2G21350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G08170 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP1G08170 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G18970 | 1 | |
| Anchor point | N/A | TC0005G32850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G32860 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0005G32860 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G52970 ZM05G04160 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G05260 ZM01G51020 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM01G51020 ZM05G05260 | 2 |