Glycine max
Glycine max , commonly known as soybean, is a legume species classified as oilseed. It's rich in proteins and is widely used as a substitute for meat and dairy products. The genome sequencing was done using the "Whole genome shotgun" approach, and finished in 2008. The soybean genome contains 20 chromosomes and is approximately 975Mb large.
Publication:
Genome sequence of the palaeopolyploid soybean. Nature 463, 178-183 (2010).
Info and Links
Source | JGI Glyma1.1 annotation of the chromosome-based Glyma1 assembly |
PLAZA identifier | gma |
NCBI link | Glycine max |
Mitochondrion | Not available | Chloroplast | DQ317523 |
Toolbox
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Annotations
Page 1 of 2716, showing 20 records out of 54302 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Gene family |
---|---|---|---|---|---|---|---|
GM00G00010 | GM00G00010.1 | 57348 | 58636 | + | scaffold_120 | coding | HOM03D000684 |
GM00G00020 | GM00G00020.1 | 477635 | 479029 | - | scaffold_23 | coding | HOM03D000099 |
GM00G00030 | GM00G00030.1 | 691190 | 693151 | + | scaffold_23 | coding | HOM03D002471 |
GM00G00040 | GM00G00040.1 | 694628 | 709411 | - | scaffold_23 | coding | HOM03D006908 |
GM00G00050 | GM00G00050.1 | 882927 | 883789 | - | scaffold_23 | coding | HOM03D000623 |
GM00G00060 | GM00G00060.1 | 3324 | 3437 | + | scaffold_1555 | coding | HOM03D024503 |
GM00G00070 | GM00G00070.1 | 1944 | 2096 | + | scaffold_973 | coding | orphan gene |
GM00G00080 | GM00G00080.1 | 2447 | 2848 | + | scaffold_973 | coding | orphan gene |
GM00G00090 | GM00G00090.1 | 2877 | 3883 | + | scaffold_973 | coding | HOM03D021574 |
GM00G00100 | GM00G00100.1 | 4194 | 4737 | + | scaffold_973 | coding | HOM03D011914 |
GM00G00110 | GM00G00110.1 | 4755 | 5375 | - | scaffold_973 | coding | HOM03D022376 |
GM00G00120 | GM00G00120.1 | 524 | 3877 | - | scaffold_1219 | coding | HOM03D017501 |
GM00G00130 | GM00G00130.1 | 5364 | 8129 | + | scaffold_589 | coding | HOM03D000025 |
GM00G00140 | GM00G00140.1 | 5162 | 5992 | + | scaffold_856 | coding | HOM03D004188 |
GM00G00150 | GM00G00150.1 | 1428 | 4601 | + | scaffold_690 | coding | HOM03D000009 |
GM00G00160 | GM00G00160.1 | 462 | 2121 | + | scaffold_920 | coding | HOM03D000577 |
GM00G00170 | GM00G00170.1 | 2054 | 2275 | + | scaffold_1029 | coding | orphan gene |
GM00G00180 | GM00G00180.1 | 4763 | 8581 | + | scaffold_90 | coding | HOM03D000006 |
GM00G00190 | GM00G00190.1 | 22828 | 24762 | + | scaffold_90 | coding | HOM03D000006 |
GM00G00200 | GM00G00200.1 | 24886 | 25615 | + | scaffold_90 | coding | HOM03D000006 |