Citrus sinensis

Citrus sinensis, sweet orange, is the first genome available from the economically important citrus genes (which includes mandarins, lemons, pummelos and grapefruit). Citrus fruits are a source of fruits and juices which are the prime source of vitamin C for humans. Yearly 10.9 million tons of citrus fruits are grown worth an estimated $9.3 billion. The complete genome sequence is a valuable resource to improve these crops. Furthermore, the fruits have unique botanical properties for which the genetic basis is unknown.

Publication:
The draft genome of sweet orange (Citrus sinensis). Nat Genetitcs 45, 59-66 (2013).

Info and Links

Source JGI v1 assembly and v1.0 annotation
PLAZA identifier csi
NCBI link Citrus sinensis
Mitochondrion Not available
Chloroplast DQ864733

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Annotations

Page 1 of 1276, showing 20 records out of 25520 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
CS00001G00010CS00001G00010.169308905-scaffold00001coding HOM03D002319
CS00001G00020CS00001G00020.11240214228-scaffold00001coding HOM03D000001
CS00001G00030CS00001G00030.11568021213+scaffold00001coding HOM03D001052
CS00001G00040CS00001G00040.12561926683-scaffold00001coding HOM03D001646
CS00001G00050CS00001G00050.13674238371-scaffold00001coding HOM03D000406
CS00001G00060CS00001G00060.13991240366-scaffold00001coding HOM03D007982
CS00001G00070CS00001G00070.14927252025-scaffold00001coding HOM03D007039
CS00001G00080CS00001G00080.15374458512+scaffold00001coding HOM03D000403
CS00001G00090CS00001G00090.16295366327-scaffold00001coding HOM03D000064
CS00001G00100CS00001G00100.17176072029-scaffold00001coding HOM03D007184
CS00001G00110CS00001G00110.17969983516-scaffold00001coding HOM03D000370
CS00001G00120CS00001G00120.19463398820+scaffold00001coding HOM03D000026
CS00001G00130CS00001G00130.199944101957+scaffold00001coding HOM03D004373
CS00001G00140CS00001G00140.1102710103349-scaffold00001coding HOM03D007655
CS00001G00150CS00001G00150.1105543111914-scaffold00001coding HOM03D000137
CS00001G00160CS00001G00160.1119363122235-scaffold00001coding HOM03D000129
CS00001G00170CS00001G00170.1126408137920-scaffold00001coding HOM03D005354
CS00001G00180CS00001G00180.1139350140730-scaffold00001coding HOM03D006339
CS00001G00190CS00001G00190.1148023152101+scaffold00001coding HOM03D000595
CS00001G00200CS00001G00200.1155320159209+scaffold00001coding HOM03D000595