Capsella rubella

Capsella rubella, commonly referred to as the Red Shepherd's purse for the characteristic shape of its siliques, is a close relative of the model organism Arabidopsis thaliana. Capsella rubella shifted from an outcrossing species to a self-compatible species less than 200,000 years ago. By comparing its genome to close relatives which still exhibit self-incompatibility the molecular and genetic mechanisms of compatibility can be examined.

Publication:
The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nature Genetics 45, 831-835 (2013)

Info and Links

Source JGI annotation v1.0 on assembly v1
PLAZA identifier cru
NCBI link Capsella rubella
Mitochondrion Not available
Chloroplast Not available

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Annotations

Page 1 of 1327, showing 20 records out of 26521 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
CRU_001G00010CRU_001G00010.120653180-scaffold_1coding HOM03D004230
CRU_001G00020CRU_001G00020.133697199+scaffold_1coding HOM03D007255
CRU_001G00030CRU_001G00030.175959248+scaffold_1coding HOM03D000228
CRU_001G00040CRU_001G00040.1966910283+scaffold_1coding HOM03D007796
CRU_001G00050CRU_001G00050.11099513393+scaffold_1coding HOM03D000894
CRU_001G00060CRU_001G00060.11431516819+scaffold_1coding HOM03D000595
CRU_001G00070CRU_001G00070.11763921235+scaffold_1coding HOM03D000595
CRU_001G00080CRU_001G00080.12215623929+scaffold_1coding HOM03D000037
CRU_001G00090CRU_001G00090.12501928823-scaffold_1coding HOM03D004577
CRU_001G00100CRU_001G00100.12919231723-scaffold_1coding HOM03D000202
CRU_001G00110CRU_001G00110.13228135344-scaffold_1coding HOM03D006089
CRU_001G00120CRU_001G00120.13535037883+scaffold_1coding HOM03D002602
CRU_001G00130CRU_001G00130.13873840143-scaffold_1coding HOM03D001770
CRU_001G00140CRU_001G00140.14132154507-scaffold_1coding HOM03D002354
CRU_001G00150CRU_001G00150.15701957579+scaffold_1coding HOM03D002201
CRU_001G00160CRU_001G00160.16071363728-scaffold_1coding HOM03D000165
CRU_001G00170CRU_001G00170.16380166934+scaffold_1coding HOM03D000002
CRU_001G00180CRU_001G00180.16742669836+scaffold_1coding HOM03D000147
CRU_001G00190CRU_001G00190.17035572324+scaffold_1coding HOM03D007112
CRU_001G00200CRU_001G00200.17340177485-scaffold_1coding HOM03D001653