Manihot esculenta

Manihot esculenta , commonly known as cassava or manioc, is a cultivated crop species in tropical and subtropical regions. Native to South America, the edible roots of the crop are now used as a source of carbohydrates in many parts of the world. Sequencing was done using 454 technology. According to the JGI source, 416Mb of the estimated 760Mb of the genome have been sequenced, with approximately 47000 predicted protein coding loci. The Joint Genome Institute provides these data in good faith, but makes no warranty, expressed or implied, nor assumes any legal liability or responsibility for any purpose for which the data are used. By accessing these data, you agree not to publish any articles containing analyses of genes or genomic data on a whole genome or chromosome scale prior to publication by JGI and its collaborators of its comprehensive genome analysis.

Publication:
The Cassava Genome: Current Progress, Future Directions. Tropical Plant Biology 5(1), 88-94 (2012).

Info and Links

Source Cassava4
PLAZA identifier mes
NCBI link Manihot esculenta
Mitochondrion Not available
Chloroplast EU117376

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Page 1 of 1540, showing 20 records out of 30800 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
ME00005G00010ME00005G00010.126125455+scaffold00005coding HOM03D000042
ME00005G00020ME00005G00020.12507726923+scaffold00005coding HOM03D000210
ME00005G00030ME00005G00030.13499337166-scaffold00005coding HOM03D000240
ME00007G00010ME00007G00010.132794340+scaffold00007coding HOM03D002616
ME00008G00010ME00008G00010.14933454760+scaffold00008coding HOM03D003127
ME00008G00020ME00008G00020.15574158420-scaffold00008coding HOM03D001803
ME00009G00010ME00009G00010.12875733544+scaffold00009coding HOM03D000283
ME00009G00020ME00009G00020.13773237935-scaffold00009coding HOM03D020612
ME00010G00010ME00010G00010.12726328137+scaffold00010coding HOM03D005061
ME00010G00020ME00010G00020.13342033773+scaffold00010coding HOM03D005061
ME00010G00030ME00010G00030.14664948004+scaffold00010coding HOM03D000902
ME00010G00040ME00010G00040.15389854819+scaffold00010coding HOM03D000902
ME00010G00050ME00010G00050.16544371471+scaffold00010coding HOM03D000902
ME00010G00060ME00010G00060.1144624150567-scaffold00010coding HOM03D000596
ME00010G00070ME00010G00070.1168182170218-scaffold00010coding HOM03D000247
ME00010G00080ME00010G00080.1204760211330+scaffold00010coding HOM03D005336
ME00010G00090ME00010G00090.1219416222945+scaffold00010coding HOM03D005336
ME00010G00100ME00010G00100.1234071234939+scaffold00010coding HOM03D002181
ME00010G00110ME00010G00110.1252321252554+scaffold00010coding HOM03D012795
ME00010G00120ME00010G00120.1263678264791+scaffold00010coding HOM03D002181