Arabidopsis lyrata

Arabidopsis lyrata is, together with Arabidopsis thaliana, a member of the Arabidopsis genus. As the thaliana species is widely used as model organism within the green plants lineage, the sequencing of the lyrata species is expected to reveal important comparative genomic data with respect to genomic content, lifestyle differences, etc. The lyrate genome has approximately the same number of genes as the thaliana genome (33000 genes), but the genome itself is 50% larger, while the species only diverged approximately 5 million years ago.

Publication:
The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nat Genet. 43(5), 476-481 (2011).

Info and Links

Source JGI v1.0
PLAZA identifier aly
NCBI link Arabidopsis lyrata
Mitochondrion Not available
Chloroplast Not available

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Page 1 of 1634, showing 20 records out of 32670 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
AL0G00000AL0G00000.1262368-scaffold_706coding HOM03D004657
AL0G00010AL0G00010.17923118+scaffold_350codingorphan gene
AL0G00020AL0G00020.138246432-scaffold_350coding HOM03D004183
AL0G00030AL0G00030.1167394+scaffold_924coding HOM03D000029
AL0G00040AL0G00040.190339794+scaffold_177coding HOM03D003944
AL0G00050AL0G00050.11097211477+scaffold_177coding HOM03D000001
AL0G00060AL0G00060.11178112259+scaffold_177coding HOM03D000001
AL0G00070AL0G00070.11234012696+scaffold_177coding HOM03D000001
AL0G00080AL0G00080.11328713999-scaffold_177coding HOM03D017480
AL0G00090AL0G00090.112502458+scaffold_139coding HOM03D000817
AL0G00100AL0G00100.133624096-scaffold_139coding HOM03D008754
AL0G00110AL0G00110.151195674+scaffold_139coding HOM03D012480
AL0G00120AL0G00120.164027994-scaffold_139coding HOM03D001348
AL0G00130AL0G00130.11151113561+scaffold_139coding HOM03D000039
AL0G00140AL0G00140.11399015338-scaffold_139coding HOM03D000028
AL0G00150AL0G00150.11541515567-scaffold_139codingorphan gene
AL0G00160AL0G00160.14391505+scaffold_945coding HOM03D003874
AL0G00170AL0G00170.18712371+scaffold_731coding HOM03D002416
AL0G00180AL0G00180.1175528+scaffold_920coding HOM03D002398
AL0G00190AL0G00190.1181614-scaffold_90coding HOM03D000055