Solanum lycopersicum
Solanum lycopersicum, tomato, is a valuable genome for several reasons. Tomatoes are of significant agricultural importance and the genome sequence can assist breeders in developing varieties with better flavor, resistance and shelf-life. But also for evolutionary studies the solanaceae are of interest as they branched of other dicots earlier than grapevine.
Publication:
The tomato genome sequence provides insights into fleshy fruit evolution. Nature 485, 635-641 (2012).
Info and Links
Source | ITAG 2.3 |
PLAZA identifier | sly |
NCBI link | Solanum lycopersicum |
Mitochondrion | Not available | Chloroplast | AM087200 |
Toolbox
Loading...please wait
Loading...please wait
Loading...please wait
Annotations
Page 1 of 1743, showing 20 records out of 34859 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Gene family |
---|---|---|---|---|---|---|---|
SL00G005000 | SL00G005000.1 | 16480 | 17940 | + | ch00 | coding | HOM03D000034 |
SL00G005020 | SL00G005020.1 | 68062 | 68764 | + | ch00 | coding | HOM03D000075 |
SL00G005040 | SL00G005040.1 | 551043 | 551576 | + | ch00 | coding | HOM03D000337 |
SL00G005050 | SL00G005050.1 | 570804 | 575319 | - | ch00 | coding | HOM03D005281 |
SL00G005060 | SL00G005060.1 | 723746 | 724018 | - | ch00 | coding | orphan gene |
SL00G005070 | SL00G005070.1 | 755300 | 755543 | - | ch00 | coding | HOM03D022801 |
SL00G005080 | SL00G005080.1 | 791493 | 792010 | - | ch00 | coding | HOM03D000350 |
SL00G005090 | SL00G005090.1 | 1061638 | 1061922 | - | ch00 | coding | orphan gene |
SL00G005100 | SL00G005100.1 | 1115784 | 1117712 | + | ch00 | coding | HOM03D000075 |
SL00G005110 | SL00G005110.1 | 1124582 | 1125325 | - | ch00 | coding | HOM03D001817 |
SL00G005120 | SL00G005120.1 | 1129470 | 1129655 | - | ch00 | coding | HOM03D001817 |
SL00G005130 | SL00G005130.1 | 1132432 | 1133349 | - | ch00 | coding | HOM03D000400 |
SL00G005140 | SL00G005140.1 | 1133637 | 1134149 | - | ch00 | coding | HOM03D001817 |
SL00G005150 | SL00G005150.1 | 1204073 | 1205342 | + | ch00 | coding | HOM03D000156 |
SL00G005160 | SL00G005160.1 | 1443094 | 1443587 | - | ch00 | coding | HOM03D001266 |
SL00G005170 | SL00G005170.1 | 1639012 | 1639639 | - | ch00 | coding | HOM03D019848 |
SL00G005180 | SL00G005180.1 | 1735071 | 1735289 | + | ch00 | coding | orphan gene |
SL00G005280 | SL00G005280.1 | 2190961 | 2191463 | + | ch00 | coding | HOM03D013138 |
SL00G005420 | SL00G005420.1 | 2244285 | 2244817 | + | ch00 | coding | HOM03D002232 |
SL00G005430 | SL00G005430.1 | 2358404 | 2358568 | - | ch00 | coding | orphan gene |