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WorkbenchAmborella trichopoda
Amborella trichopoda is strongly supported as the single living species of the sister lineage to all other extant flowering plants, providing a unique reference for inferring the genome content and structure of the most recent common ancestor (MRCA) of living angiosperms.
Publication:
The Amborella Genome and the Evolution of Flowering Plants. Science 342, 1241089 (2013)
Info and Links
| Source | Amborella V1.0 |
| PLAZA identifier | atr |
| NCBI link | Amborella trichopoda |
| Mitochondrion | Not available | Chloroplast | AJ506156 |
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Annotations
Page 1 of 1349, showing 20 records out of 26975 total, starting on record 1, ending on 20
| Gene | Transcript | Start | Stop | Strand | Chr | Type | Gene family |
|---|---|---|---|---|---|---|---|
| ATR_00001G00010 | ATR_00001G00010.1 | 3379 | 6049 | - | scaffold00001 | coding | HOM03D000485 |
| ATR_00001G00020 | ATR_00001G00020.1 | 34546 | 35097 | - | scaffold00001 | coding | HOM03D000664 |
| ATR_00001G00030 | ATR_00001G00030.1 | 40952 | 43276 | - | scaffold00001 | coding | HOM03D000065 |
| ATR_00001G00040 | ATR_00001G00040.1 | 54291 | 57818 | + | scaffold00001 | coding | HOM03D000001 |
| ATR_00001G00050 | ATR_00001G00050.1 | 58531 | 72944 | - | scaffold00001 | coding | HOM03D001577 |
| ATR_00001G00060 | ATR_00001G00060.1 | 79788 | 81550 | - | scaffold00001 | coding | HOM03D001577 |
| ATR_00001G00070 | ATR_00001G00070.1 | 112881 | 121938 | + | scaffold00001 | coding | HOM03D001530 |
| ATR_00001G00080 | ATR_00001G00080.1 | 129328 | 136363 | + | scaffold00001 | coding | HOM03D001530 |
| ATR_00001G00090 | ATR_00001G00090.1 | 138722 | 140092 | + | scaffold00001 | coding | HOM03D000147 |
| ATR_00001G00100 | ATR_00001G00100.1 | 143173 | 145193 | - | scaffold00001 | coding | HOM03D004564 |
| ATR_00001G00110 | ATR_00001G00110.1 | 162983 | 174402 | - | scaffold00001 | coding | HOM03D001928 |
| ATR_00001G00120 | ATR_00001G00120.1 | 181591 | 198384 | + | scaffold00001 | coding | HOM03D001708 |
| ATR_00001G00130 | ATR_00001G00130.1 | 201972 | 206735 | - | scaffold00001 | coding | HOM03D000061 |
| ATR_00001G00140 | ATR_00001G00140.1 | 214485 | 214679 | + | scaffold00001 | coding | orphan gene |
| ATR_00001G00150 | ATR_00001G00150.1 | 227514 | 230618 | + | scaffold00001 | coding | HOM03D000175 |
| ATR_00001G00160 | ATR_00001G00160.1 | 239742 | 248036 | + | scaffold00001 | coding | HOM03D000164 |
| ATR_00001G00170 | ATR_00001G00170.1 | 248564 | 257481 | - | scaffold00001 | coding | HOM03D004712 |
| ATR_00001G00180 | ATR_00001G00180.1 | 266945 | 278979 | + | scaffold00001 | coding | HOM03D001078 |
| ATR_00001G00190 | ATR_00001G00190.1 | 281988 | 282473 | + | scaffold00001 | coding | HOM03D015931 |
| ATR_00001G00200 | ATR_00001G00200.1 | 292953 | 294206 | + | scaffold00001 | coding | HOM03D000854 |