Gene: PPE_003G17980 (Prunus persica)

Overview top

Gene Identifier
PPE_003G17980
Transcript Identifier
PPE_003G17980.1
Gene Type
Coding gene
Location
scaffold_3 : 15459069-15463582 : positive

Family

Gene family
HOM03D000490
(262 genes in 31 species)
specific family
Subfamily
ORTHO03D009067
(28 genes in 25 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Phytochrome A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidppa000506m
idPAC:17663653

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009584IEAGenome Projectdetection of visible light
GO:0018298IEAGenome Projectprotein-chromophore linkage
GO:0007165IEAGenome Projectsignal transduction
GO:0010467IEAPLAZA Homologygene expressionHOM03D000490
GO:0051606IEAPLAZA Homologydetection of stimulusHOM03D000490
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000490
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000490
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000490
GO:0009583IEAPLAZA Homologydetection of light stimulusHOM03D000490
GO:0009605IEAPLAZA Homologyresponse to external stimulusHOM03D000490
GO:0009582IEAPLAZA Homologydetection of abiotic stimulusHOM03D000490
GO:0009581IEAPLAZA Homologydetection of external stimulusHOM03D000490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008020IEAGenome ProjectG-protein coupled photoreceptor activity
GO:0000155IEAGenome Projectphosphorelay sensor kinase activity
GO:0005515IEAGenome Projectprotein binding
GO:0005524IEAGenome ProjectATP binding
GO:0004871IEAInterProsignal transducer activity
GO:0038023IEAPLAZA Homologysignaling receptor activityHOM03D000490
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003018GAF domain
IPR013767PAS fold
IPR000014PAS domain
IPR001294Phytochrome
IPR013654PAS fold-2
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR013516Phytochrome chromophore binding site
IPR005467Signal transduction histidine kinase, core
IPR013515Phytochrome, central region
IPR016132Phytochrome chromophore attachment domain
IPR003661Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain

Mapman id Description
30.11signalling.light
No SignalP domains detected for this gene.