Chlamydomonas reinhardtii

Chlamydomonas rheinhartii is a unicellular green algae that has a pair of flagella to make it motile. It's now used by JGI as a benchmark for new sequencing technologies to detect low abundant mRNAs using 454 and Solexa sequencers.

Publication:
The Chlamydomonas genome reveals the evolution of key animal and plant functions.Science 318, 245-50 (2007).

Info and Links

Source JGI v5.0 assembly, annot v5.3.1 based on Augustus u11.6
PLAZA identifier cre
NCBI link Chlamydomonas reinhardtii
Mitochondrion AF008237
Chloroplast BK000554

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Annotations

Page 1 of 894, showing 20 records out of 17872 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
CR00G00010CR00G00010.121352602-scaffold_38coding HOM03D016025
CR00G00020CR00G00020.11451815+scaffold_45coding HOM03D012295
CR00G00030CR00G00030.1220411596+scaffold_45coding HOM03D007495
CR00G00040CR00G00040.11423014616-scaffold_45coding HOM03D017375
CR00G00050CR00G00050.11472817065-scaffold_23coding HOM03D007719
CR00G00060CR00G00060.11753717839+scaffold_23coding HOM03D009596
CR00G00070CR00G00070.11967720291-scaffold_23coding HOM03D000044
CR00G00080CR00G00080.12145321825+scaffold_23coding HOM03D008778
CR00G00090CR00G00090.13848041383+scaffold_23coding HOM03D007847
CR00G00100CR00G00100.14249944794-scaffold_23coding HOM03D009760
CR00G00110CR00G00110.14555345924+scaffold_23codingorphan gene
CR00G00120CR00G00120.15003550456-scaffold_23coding HOM03D016111
CR00G00130CR00G00130.15434654858+scaffold_23coding HOM03D017420
CR00G00140CR00G00140.15999460702-scaffold_23coding HOM03D008602
CR00G00150CR00G00150.16145761791+scaffold_23coding HOM03D017025
CR00G00160CR00G00160.16738369190-scaffold_23codingorphan gene
CR00G00170CR00G00170.18927590369+scaffold_23coding HOM03D004152
CR00G00180CR00G00180.1107652109300-scaffold_23codingorphan gene
CR00G00190CR00G00190.1112376113235-scaffold_23codingorphan gene
CR00G00200CR00G00200.1113764114066+scaffold_23coding HOM03D007986