Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
FV3G39320
(Fragaria vesca)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Fragaria vesca | Orthologous gene family | FV3G39320 | 1 |  |
| Tree-based ortholog | FV3G39320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | FV3G39320 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00045G01640 ATR_00047G00200 ATR_00047G00210 ... | 4 | |
| Anchor point | N/A | ATR_00003G00440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G00440 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL7G24700 AL1G09260 AL7G32840 | 3 | |
| Anchor point | N/A | AL7G27070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G40990 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT4G18130 AT1G09570 AT5G35840 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G18790 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV6G07240 BV9G06620 | 2 | |
| Anchor point | N/A | BV3G04210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G04210 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G40130 BR05G34420 | 2 | |
| Tree-based ortholog | 1-to-many | BR01G09310 BR06G06020 BR09G51140 ... | 4 | ||
| Anchor point | N/A | BR05G26480 BR03G34950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G26480 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_007G22140 CRU_001G08490 CRU_007G30310 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G31810 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00017G01000 CP00048G02300 CP00136G00260 ... | 5 | |
| Anchor point | N/A | CP00009G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00017G01000 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR14G01560 CR11G00260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G11410 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL03G06930 CL08G08880 CL08G08910 ... | 4 | |
| Anchor point | N/A | CL05G07410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G06930 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00007G01900 CS00102G00140 CS00859G00040 | 3 | |
| Anchor point | N/A | CS00016G01390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00016G01390 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00001G08280 CM00096G00060 CM00096G00100 ... | 5 | |
| Anchor point | N/A | CM00006G08240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G08240 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0004G02650 EG0002G11170 EG0011G30340 | 3 | |
| Anchor point | N/A | EG0001G02950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G02950 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM15G23400 GM09G11600 GM03G38620 ... | 6 | |
| Anchor point | N/A | GM09G03990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G03990 GM15G14980 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR11G04090 GR07G29280 GR13G20390 ... | 4 | |
| Anchor point | N/A | GR11G20020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G20020 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G014350 LJ5G026440 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G023820 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G266050 MD00G266100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G266100 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME06582G00330 ME02264G00680 ME10434G00010 | 3 | |
| Anchor point | N/A | ME00708G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00708G00460 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT2G049520 MT1G085160 | 2 | |
| Anchor point | N/A | MT2G034040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G034040 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G51030 OS03G54084 OS03G19590 | 3 | |
| Anchor point | N/A | OS03G19590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G19590 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL01G01660 OL01G04480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G01280 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00233G00100 PP00081G00760 PP00091G00620 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00164G00330 PP00047G00170 PP00233G00100 ... | 7 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT13G00030 | 1 | |
| Anchor point | N/A | PT10G14590 PT08G10520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G10520 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G11060 | 1 | |
| Anchor point | N/A | PPE_001G11060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G11060 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC29693G01130 RC30128G03840 | 2 | |
| Anchor point | N/A | RC29889G00660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29889G00660 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G071260 SL10G044670 SL07G045480 | 3 | |
| Anchor point | N/A | SL01G059870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G059870 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G017600 ST10G011220 ST07G017280 | 3 | |
| Anchor point | N/A | ST01G018070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G018070 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP3G05570 TP3G05580 | 2 | |
| Tree-based ortholog | 1-to-many | TP7G15980 TP1G08170 TP7G06270 ... | 4 | ||
| Anchor point | N/A | TP3G15270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G15270 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0006G15490 TC0005G32860 TC0001G18970 | 3 | |
| Anchor point | N/A | TC0004G30140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G30140 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV10G03430 VV14G10540 VV12G09660 | 3 | |
| Anchor point | N/A | VV05G11540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G11540 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM03G17260 ZM04G00750 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G51020 ZM05G05260 ZM05G04160 ... | 7 | ||
| Anchor point | N/A | ZM01G13510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G13510 ZM09G22340 | 2 |