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Integrative Orthology Viewer:
PT08G11740
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G35040 PT08G11740 PT17G07390 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT01G35040 PT08G11740 PT17G07390 | 3 | ||
| Tree-based ortholog | PT08G11740 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00055G01480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00055G01480 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00055G01480 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G14740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G14740 | 1 | ||
| Tree-based ortholog | 1-to-many | AL6G14740 AL8G34530 AL6G13730 | 3 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G14950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G14950 | 1 | ||
| Tree-based ortholog | 1-to-many | AT5G14950 AT5G66150 AT5G13980 | 3 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G06490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV2G06490 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV0G38890 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G07230 BR03G06140 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G06140 | 1 | ||
| Tree-based ortholog | 1-to-many | BR03G06140 BR02G07230 BR09G07880 ... | 4 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G12810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G12810 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_006G12810 CRU_006G11880 CRU_008G27500 | 3 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP03592G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00006G02690 | 1 | ||
| Tree-based ortholog | 1-to-many | CP03592G00010 CP02646G00010 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G12770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G12770 | 1 | ||
| Tree-based ortholog | 1-to-many | CL10G12770 CL01G20550 CL01G07660 | 3 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00028G00820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00028G00820 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00497G00100 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00011G08630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00011G08630 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00007G09540 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G18800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0010G18800 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0007G11570 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G37970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G37970 | 1 | ||
| Tree-based ortholog | 1-to-many | FV0G08880 FV1G13410 FV6G51880 ... | 5 | ||
| Glycine max | Orthologous gene family | many-to-many | GM13G04761 GM19G01890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM13G04761 GM19G01890 | 2 | ||
| Tree-based ortholog | 1-to-1 | GM16G05230 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G25860 GR06G02750 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G02750 | 1 | ||
| Tree-based ortholog | 1-to-many | GR06G02750 GR01G25860 GR03G11660 ... | 7 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G016200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G016200 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ1G052430 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD17G003170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD17G003170 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G030540 MD00G030570 MD00G018960 ... | 5 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME02793G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02793G00040 | 1 | ||
| Tree-based ortholog | 1-to-many | ME06916G01140 ME01701G00710 ME02688G00090 ... | 7 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G071680 MT6G008850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT4G071680 MT6G008850 | 2 | ||
| Tree-based ortholog | 1-to-many | MT6G008850 MT7G084030 MT3G098650 ... | 6 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G13650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G13650 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS06G13650 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00010G00170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00010G00170 | 1 | ||
| Tree-based ortholog | 1-to-1 | PP00010G00170 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G25530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G25530 | 1 | ||
| Tree-based ortholog | 1-to-many | PPE_003G29000 PPE_007G19120 PPE_005G15000 ... | 5 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29822G00950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29822G00950 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30131G01220 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G087290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G087290 | 1 | ||
| Tree-based ortholog | 1-to-many | SL06G068860 SL02G087290 SL02G083700 | 3 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G035560 | 1 | |
| Anchor point | N/A | ST06G026070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G035560 | 1 | ||
| Tree-based ortholog | 1-to-many | ST02G035560 ST06G026070 ST02G027020 | 3 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G29100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G29100 | 1 | ||
| Tree-based ortholog | 1-to-many | TP2G30540 TP6G29100 TP6G30020 | 3 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G06860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G06860 | 1 | ||
| Tree-based ortholog | 1-to-many | TC0004G06860 TC0004G04720 TC0001G01510 ... | 5 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G12610 | 1 | |
| Tree-based ortholog | 1-to-many | VV17G06420 VV14G12610 VV14G13700 ... | 6 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM06G16990 ZM09G00330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM06G16990 ZM09G00330 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM09G00330 ZM06G16990 | 2 |