PLAZA 3.0 Dicots gene overview : AT5G14950

Gene: AT5G14950 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G14950
Transcript Identifier: AT5G14950.1
Gene Type: Coding gene
Location: 5 : 4837484-4841792 : negative

Family

Gene family: HOM03D000644
(212 genes in 31 species)
specific family
Subfamily: ORTHO03D004403
(35 genes in 28 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: golgi alpha-mannosidase II

Curated Summary: Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans.

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Identifiers

Identifier	Name
alias	ATGMII
alias	golgi alpha-mannosidase II
alias	GMII

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006487	IDA, RCA	Gene Ontology	protein N-linked glycosylation	1 2
GO:0006486	RCA	Gene Ontology	protein glycosylation	1
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0006013	IEA	InterPro	mannose metabolic process
GO:0019318	IEA	PLAZA Homology	hexose metabolic process	HOM03D000644
GO:0005996	IEA	PLAZA Homology	monosaccharide metabolic process	HOM03D000644

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004559	IDA, ISS, IEA	Gene Ontology	alpha-mannosidase activity	1 2
GO:0030246	IEA	InterPro	carbohydrate binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0015923	IEA	InterPro	mannosidase activity
GO:0003824	IEA	InterPro	catalytic activity
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005794	IDA, ISM	Gene Ontology	Golgi apparatus	1 2
GO:0005768	IDA	Gene Ontology	endosome	1
GO:0005802	IDA	Gene Ontology	trans-Golgi network	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013780	Glycosyl hydrolase, family 13, all-beta
IPR015341	Glycoside hydrolase, family 38, central domain
IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682	Glycosyl hydrolase family 38, C-terminal
IPR027291	Glycoside hydrolase 38/57, N-terminal domain
IPR000602	Glycoside hydrolase family 38, N-terminal domain
IPR011013	Galactose mutarotase-like domain

Mapman id	Description
29.7.7	protein.glycosylation.mannosyl-oligosaccharide-1,3-1,6-alpha-mannosidase(GMII)

No SignalP domains detected for this gene.