Gene: FV6G51880 (Fragaria vesca)

Overview top

Gene Identifier
FV6G51880
Transcript Identifier
FV6G51880.1
Gene Type
Coding gene
Location
LG6 : 38198384-38218288 : negative

Family

Gene family
HOM03D000644
(212 genes in 31 species)
specific family
Subfamily
ORTHO03D000289
(109 genes in 29 species)
specific family

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Descriptions

Description
Lysosomal alpha-mannosidase (Laman), Precursor (probable)
Description (AnnoMine)
Lysosomal alpha-mannosidase

Identifiers

Identifier Name
pidgene01394

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAInterProcarbohydrate metabolic process
GO:0006013IEAInterPromannose metabolic process
GO:0019318IEAPLAZA Homologyhexose metabolic processHOM03D000644
GO:0005996IEAPLAZA Homologymonosaccharide metabolic processHOM03D000644

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0030246IEAInterProcarbohydrate binding
GO:0008270IEAInterProzinc ion binding
GO:0015923IEAInterPromannosidase activity
GO:0003824IEAInterProcatalytic activity
GO:0004559IEAInterProalpha-mannosidase activity
GO:0004553IEAInterProhydrolase activity, hydrolyzing O-glycosyl compounds

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT5G13980
GO:0009505ISOPLAZA Integrative Orthologyplant-type cell wallAT5G13980 AT3G26720
GO:0005618ISOPLAZA Integrative Orthologycell wallAT5G13980
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT5G13980 AT3G26720
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT5G13980 AT3G26720

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015341Glycoside hydrolase, family 38, central domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011682Glycosyl hydrolase family 38, C-terminal
IPR017907Zinc finger, RING-type, conserved site
IPR013780Glycosyl hydrolase, family 13, all-beta
IPR001841Zinc finger, RING-type
IPR027291Glycoside hydrolase 38/57, N-terminal domain
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011013Galactose mutarotase-like domain
IPR000602Glycoside hydrolase family 38, N-terminal domain

No MapMan annotations defined for this gene.
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network