Gene: CL01G20550 (Citrullus lanatus)
Overview 
- Gene Identifier
- CL01G20550
- Transcript Identifier
- CL01G20550.1
- Gene Type
- Coding gene
- Location
- Chr1 : 29837351-29844392 : positive
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
Lysosomal alpha-mannosidase
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
GeneName | Cla014297 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
GO:0006013 | IEA | InterPro | mannose metabolic process | |
GO:0019318 | IEA | PLAZA Homology | hexose metabolic process | HOM03D000644 |
GO:0005996 | IEA | PLAZA Homology | monosaccharide metabolic process | HOM03D000644 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0030246 | IEA | InterPro | carbohydrate binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0015923 | IEA | InterPro | mannosidase activity | |
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0004559 | IEA | InterPro | alpha-mannosidase activity | |
GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT5G13980 |
GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G13980 AT3G26720 |
GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT5G13980 AT3G26720 |
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G13980 |
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT5G13980 AT3G26720 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR011330 | Glycoside hydrolase/deacetylase, beta/alpha-barrel |
IPR013780 | Glycosyl hydrolase, family 13, all-beta |
IPR015341 | Glycoside hydrolase, family 38, central domain |
IPR011682 | Glycosyl hydrolase family 38, C-terminal |
IPR000602 | Glycoside hydrolase family 38, N-terminal domain |
IPR027291 | Glycoside hydrolase 38/57, N-terminal domain |
IPR011013 | Galactose mutarotase-like domain |
No MapMan annotations defined for this gene.
SignalP | Description |
---|---|
SignalP-noTM | Signal Peptide detected using noTM network |