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WorkbenchGene: AT5G13980 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G13980
- Transcript Identifier
- AT5G13980.1
- Gene Type
- Coding gene
- Location
- 5 : 4508626-4514334 : positive
Family
- Gene family
- Subfamily
Identifiers
| Identifier | Name |
|---|
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Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0007020 | RCA | Gene Ontology | microtubule nucleation | 1 |
| GO:0019344 | RCA | Gene Ontology | cysteine biosynthetic process | 1 |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0006013 | IEA | InterPro | mannose metabolic process | |
| GO:0019318 | IEA | PLAZA Homology | hexose metabolic process | HOM03D000644 |
| GO:0005996 | IEA | PLAZA Homology | monosaccharide metabolic process | HOM03D000644 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0004559 | ISS, IEA | Gene Ontology | alpha-mannosidase activity | 1 |
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0015923 | IEA | InterPro | mannosidase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | 1 |
| GO:0005773 | IDA | Gene Ontology | vacuole | 1 |
| GO:0005618 | IDA | Gene Ontology | cell wall | 1 |
| GO:0005774 | IDA | Gene Ontology | vacuolar membrane | 1 |
| GO:0009505 | IDA | Gene Ontology | plant-type cell wall | 1 |
| GO:0048046 | IDA | Gene Ontology | apoplast | 1 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| InterPro | Description |
|---|---|
| IPR015341 | Glycoside hydrolase, family 38, central domain |
| IPR011013 | Galactose mutarotase-like domain |
| IPR011330 | Glycoside hydrolase/deacetylase, beta/alpha-barrel |
| IPR011682 | Glycosyl hydrolase family 38, C-terminal |
| IPR027291 | Glycoside hydrolase 38/57, N-terminal domain |
| IPR000602 | Glycoside hydrolase family 38, N-terminal domain |
| IPR013780 | Glycosyl hydrolase, family 13, all-beta |
| Mapman id | Description |
|---|---|
| 26.3.3 | misc.gluco-, galacto- and mannosidases.alpha-mannosidase |
| SignalP | Description |
|---|---|
| SignalP-noTM | Signal Peptide detected using noTM network |