Gene: ATR_00055G01480 (Amborella trichopoda)

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Gene Identifier
ATR_00055G01480
Transcript Identifier
ATR_00055G01480.1
Gene Type
Coding gene
Location
scaffold00055 : 4043001-4045766 : negative

Family

Gene family
HOM03D000644
(212 genes in 31 species)
specific family
Subfamily
ORTHO03D004403
(35 genes in 28 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Alpha-mannosidase 2x
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00055.149
idevm_27.model.AmTr_v1.0_scaffold00055.149

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAInterProcarbohydrate metabolic process
GO:0006013IEAInterPromannose metabolic process
GO:0006487ISOPLAZA Integrative Orthologyprotein N-linked glycosylationAT5G14950
GO:0019318IEAPLAZA Homologyhexose metabolic processHOM03D000644
GO:0005996IEAPLAZA Homologymonosaccharide metabolic processHOM03D000644

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030246IEAInterProcarbohydrate binding
GO:0008270IEAInterProzinc ion binding
GO:0015923IEAInterPromannosidase activity
GO:0003824IEAInterProcatalytic activity
GO:0004553IEAInterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559IEAInterProalpha-mannosidase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005802ISOPLAZA Integrative Orthologytrans-Golgi networkAT5G14950
GO:0005768ISOPLAZA Integrative OrthologyendosomeAT5G14950
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT5G14950

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011682Glycosyl hydrolase family 38, C-terminal
IPR000602Glycoside hydrolase family 38, N-terminal domain
IPR011013Galactose mutarotase-like domain
IPR013780Glycosyl hydrolase, family 13, all-beta
IPR027291Glycoside hydrolase 38/57, N-terminal domain
IPR015341Glycoside hydrolase, family 38, central domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.