Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00106G00310
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00106G00310 | 1 |  |
| Tree-based ortholog | CS00106G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00106G00310 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00010G00460 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00010G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G00460 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G07820 | 1 | |
| Tree-based ortholog | 1-to-many | AL8G22300 AL2G20050 AL0G07940 ... | 5 | ||
| Anchor point | N/A | AL8G22300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G22300 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G07420 | 1 | |
| Tree-based ortholog | 1-to-many | AT5G56680 AT1G70980 | 2 | ||
| Anchor point | N/A | AT5G56680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G56680 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G47870 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G07220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G07220 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR03G30960 BR05G33890 | 2 | |
| Tree-based ortholog | 1-to-many | BR10G09880 BR03G11970 BR10G10330 | 3 | ||
| Anchor point | N/A | BR10G09880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G09880 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G06630 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_008G16740 | 1 | ||
| Anchor point | N/A | CRU_008G16740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G16740 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00008G00830 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00078G00550 | 1 | ||
| Anchor point | N/A | CP00078G00550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00078G00550 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G11350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G11350 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G07950 | 1 | |
| Tree-based ortholog | 1-to-1 | CL03G16010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G16010 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00046G01280 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00025G01720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G01720 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G06280 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0003G07690 | 1 | ||
| Anchor point | N/A | EG0003G07690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G07690 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G13580 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G19770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G19770 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G22320 GM16G09690 | 2 | |
| Tree-based ortholog | 1-to-many | GM09G16901 GM05G36140 GM08G03500 | 3 | ||
| Anchor point | N/A | GM08G03500 GM05G36140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G03500 GM05G36140 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR01G10260 GR01G22900 GR07G15870 | 3 | |
| Tree-based ortholog | 1-to-1 | GR10G08040 | 1 | ||
| Anchor point | N/A | GR10G08040 GR04G28320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G08040 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G022300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G022300 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD05G016830 MD10G011260 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G371160 MD00G251660 MD03G021380 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD03G021380 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME06158G00290 ME07036G00110 | 2 | |
| Tree-based ortholog | 1-to-1 | ME09501G00130 | 1 | ||
| Anchor point | N/A | ME09501G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09501G00130 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G011530 | 1 | |
| Tree-based ortholog | 1-to-many | MT7G101050 MT8G102050 | 2 | ||
| Anchor point | N/A | MT8G102050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G102050 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS01G27520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G27520 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL11G02040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G02040 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00056G01000 PP00056G01040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00056G01000 PP00056G01040 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT02G24970 | 1 | |
| Tree-based ortholog | 1-to-many | PT18G07000 PT06G15390 | 2 | ||
| Anchor point | N/A | PT06G15390 PT18G07000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT18G07000 PT06G15390 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_008G20810 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_004G14740 PPE_007G08190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G14740 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC28708G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29912G01160 | 1 | ||
| Anchor point | N/A | RC29912G01160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29912G01160 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL10G080710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G080710 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST10G022480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G022480 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G06340 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G18450 | 1 | ||
| Anchor point | N/A | TP6G18450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G18450 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0009G09050 | 1 | |
| Anchor point | N/A | TC0009G09050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G09050 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G15770 | 1 | |
| Tree-based ortholog | 1-to-many | VV16G01380 VV00G20880 VV06G10010 ... | 5 | ||
| Anchor point | N/A | VV11G04050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G04050 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM08G08390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G08390 | 1 |