Gene: TP6G18450 (Thellungiella parvula)

Overview top

Gene Identifier
TP6G18450
Transcript Identifier
TP6G18450.1
Gene Type
Coding gene
Location
ch6-6 : 2706832-2709155 : positive

Family

Gene family
HOM03D001110
(138 genes in 31 species)
specific family
Subfamily
ORTHO03D010179
(26 genes in 19 species)
specific family

Loading...please wait

Descriptions

Description
similar to AT5G56680|SYNC1
Description (AnnoMine)
Asparagine--tRNA ligase

Identifiers

Identifier Name
pidTp6g18450

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006421IEAInterProasparaginyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G56680
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT5G56680
GO:0043038IEAPLAZA Homologyamino acid activationHOM03D001110
GO:0043039IEAPLAZA HomologytRNA aminoacylationHOM03D001110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAInterPronucleotide binding
GO:0004816IEAInterProasparagine-tRNA ligase activity
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity
GO:0016875IEAPLAZA Homologyligase activity, forming carbon-oxygen bondsHOM03D001110
GO:0016876IEAPLAZA Homologyligase activity, forming aminoacyl-tRNA and related compoundsHOM03D001110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G56680 AT1G70980
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G56680
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G56680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006195Aminoacyl-tRNA synthetase, class II
IPR004522Asparagine-tRNA ligase
IPR000738WHEP-TRS
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR012340Nucleic acid-binding, OB-fold
IPR009068S15/NS1, RNA-binding

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.