Gene: PT18G07000 (Populus trichocarpa)

Overview top

Gene Identifier
PT18G07000
Transcript Identifier
PT18G07000.1
Gene Type
Coding gene
Location
Chr18 : 8888425-8891025 : positive

Family

Gene family
HOM03D001110
(138 genes in 31 species)
specific family
Subfamily
ORTHO03D010179
(26 genes in 19 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Asparagine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.018G070000.1
idPAC:27010169

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006421IEAInterProasparaginyl-tRNA aminoacylation
GO:0043038IEAPLAZA Homologyamino acid activationHOM03D001110
GO:0043039IEAPLAZA HomologytRNA aminoacylationHOM03D001110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004816IEAInterProasparagine-tRNA ligase activity
GO:0016875IEAPLAZA Homologyligase activity, forming carbon-oxygen bondsHOM03D001110
GO:0016876IEAPLAZA Homologyligase activity, forming aminoacyl-tRNA and related compoundsHOM03D001110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G70980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012340Nucleic acid-binding, OB-fold
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR000738WHEP-TRS
IPR004522Asparagine-tRNA ligase
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR009068S15/NS1, RNA-binding
IPR006195Aminoacyl-tRNA synthetase, class II
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

Mapman id Description
29.1.22protein.aa activation.asparagine-tRNA ligase
No SignalP domains detected for this gene.