Integrative Orthology Viewer: BR01G00540 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR01G00530 BR01G00540 BR06G39170 ... | 5 | |
Tree-based ortholog | BR01G00540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR01G00530 BR06G39180 BR01G00540 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00001G02250 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00186G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00001G02250 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G03450 AL4G00580 | 2 | |
Tree-based ortholog | 1-to-many | AL2G03450 AL4G00570 AL4G00580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G03450 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G62020 AT2G21390 | 2 | |
Tree-based ortholog | 1-to-many | AT1G62020 AT2G21390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G62020 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G08250 BV9G12860 | 2 | |
Tree-based ortholog | 1-to-many | BV1G08250 BV9G12860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G12860 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G02860 CRU_004G00450 | 2 | |
Tree-based ortholog | 1-to-many | CRU_002G02860 CRU_004G00450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G02860 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00139G00260 CP00139G00270 CP00150G00460 | 3 | |
Tree-based ortholog | 1-to-many | CP00139G00270 CP00139G00250 CP00139G00260 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00139G00270 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR13G01000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G01000 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G04920 CL11G14870 CL11G14880 | 3 | |
Tree-based ortholog | 1-to-many | CL11G14880 CL11G14870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G04920 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00237G00220 | 1 | |
Tree-based ortholog | 1-to-1 | CS00237G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00237G00220 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00019G03440 CM00059G01590 CM00059G01600 | 3 | |
Tree-based ortholog | 1-to-many | CM00059G01600 CM00059G01590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00019G03440 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G12510 EG0007G12530 | 2 | |
Tree-based ortholog | 1-to-many | EG0007G12510 EG0007G12530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0007G12510 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G14860 FV5G36370 | 2 | |
Tree-based ortholog | 1-to-1 | FV5G36370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G14860 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G43440 GM10G34310 GM11G12080 ... | 5 | |
Tree-based ortholog | 1-to-many | GM20G33270 GM10G34310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM20G33270 GM10G34310 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G24720 GR05G24730 GR08G03130 ... | 5 | |
Tree-based ortholog | 1-to-many | GR08G03130 GR08G03140 GR12G15450 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR12G15450 GR05G24730 GR08G03140 ... | 4 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ3G047350 LJ5G029480 | 2 | |
Tree-based ortholog | 1-to-1 | LJ5G029480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G047350 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G293690 MD00G293750 MD10G020210 | 3 | |
Tree-based ortholog | 1-to-many | MD00G248440 MD00G293630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD06G017900 MD14G021150 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02994G00340 ME07012G00670 ME09277G00040 | 3 | |
Tree-based ortholog | 1-to-1 | ME07012G00670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09277G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G090827 MT4G071130 | 2 | |
Tree-based ortholog | 1-to-1 | MT1G090827 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G090827 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G50340 OS03G50350 OS09G04110 | 3 | |
Tree-based ortholog | 1-to-many | OS03G50350 OS03G50340 OS09G04110 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS03G50350 OS09G04110 OS03G50340 | 3 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL04G01580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G01580 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00135G00180 PP00086G00710 PP00011G00390 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00086G00710 PP00135G00180 PP00011G00390 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G07480 PT15G06970 | 2 | |
Tree-based ortholog | 1-to-many | PT15G06970 PT12G07480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT15G06970 PT12G07480 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G08760 PPE_005G22230 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_004G08760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G22230 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30006G00050 RC30131G02510 | 2 | |
Tree-based ortholog | 1-to-1 | RC30006G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30131G02510 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G080980 SL07G032100 | 2 | |
Tree-based ortholog | 1-to-1 | SL04G080980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G032100 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G034370 ST07G015210 | 2 | |
Tree-based ortholog | 1-to-1 | ST04G034370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST07G015210 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP7G36760 | 1 | |
Tree-based ortholog | 1-to-many | TP7G36760 TP4G00570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G36760 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G07430 TC0002G07440 TC0008G03520 | 3 | |
Tree-based ortholog | 1-to-1 | TC0008G03520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0002G07430 TC0002G07440 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G09820 | 1 | |
Tree-based ortholog | 1-to-1 | VV18G09820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G09820 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G50560 ZM03G01540 ZM05G05600 | 3 | |
Tree-based ortholog | 1-to-many | ZM05G05600 ZM01G50560 ZM03G01550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G05600 ZM01G50560 | 2 |