PLAZA 3.0 Dicots gene overview : BR01G00530

Gene: BR01G00530 (Brassica rapa)

Overview

Gene Identifier: BR01G00530
Transcript Identifier: BR01G00530.1
Gene Type: Coding gene
Location: A01 : 236266-240324 : positive

Family

Gene family: HOM03D000291
(391 genes in 31 species)
specific family
Subfamily: ORTHO03D000719
(69 genes in 28 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

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Descriptions

Description (AnnoMine): Vegetative incompatibility protein HET-E-1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
protein_id	Bra011849

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0016192	IEA	InterPro	vesicle-mediated transport
GO:0006886	IEA	InterPro	intracellular protein transport
GO:0009987	IEA	PLAZA Homology	cellular process	HOM03D000291

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding
GO:0005198	IEA	InterPro	structural molecule activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0030126	IEA	InterPro	COPI vesicle coat
GO:0030117	IEA	InterPro	membrane coat
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G62020 AT2G21390
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G62020
GO:0032991	IEA	PLAZA Homology	macromolecular complex	HOM03D000291
GO:0044424	IEA	PLAZA Homology	intracellular part	HOM03D000291
GO:0016020	ISO	PLAZA Integrative Orthology	membrane	AT1G62020

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR020472	G-protein beta WD-40 repeat
IPR001680	WD40 repeat
IPR015943	WD40/YVTN repeat-like-containing domain
IPR019775	WD40 repeat, conserved site
IPR006692	Coatomer, WD associated region
IPR011048	Cytochrome cd1-nitrite reductase-like, haem d1 domain
IPR017986	WD40-repeat-containing domain
IPR010714	Coatomer, alpha subunit, C-terminal

Mapman id	Description
31.4	cell.vesicle transport

No SignalP domains detected for this gene.