Gene: BR01G00540 (Brassica rapa)

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Gene Identifier
BR01G00540
Transcript Identifier
BR01G00540.1
Gene Type
Coding gene
Location
A01 : 242644-245122 : positive

Family

Gene family
HOM03D000291
(391 genes in 31 species)
specific family
Subfamily
ORTHO03D000719
(69 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Coatomer subunit alpha
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra011848

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016192IEAInterProvesicle-mediated transport
GO:0006886IEAInterProintracellular protein transport
GO:0009987IEAPLAZA Homologycellular processHOM03D000291

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005198IEAInterProstructural molecule activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030126IEAInterProCOPI vesicle coat
GO:0030117IEAInterPromembrane coat
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT1G62020 AT2G21390
GO:0005886ISOPLAZA Tree-based Orthologyplasma membraneAT1G62020
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000291
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000291

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010714Coatomer, alpha subunit, C-terminal
IPR006692Coatomer, WD associated region

Mapman id Description
31.4cell.vesicle transport
No SignalP domains detected for this gene.