Gene: BR06G39170 (Brassica rapa)

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Gene Identifier
BR06G39170
Transcript Identifier
BR06G39170.1
Gene Type
Coding gene
Location
A06 : 25913912-25919708 : negative

Family

Gene family
HOM03D000291
(391 genes in 31 species)
specific family
Subfamily
ORTHO03D000719
(69 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
TAF5-like RNA polymerase II p300/CBP-associated factor-associated
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra033630

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016192IEAInterProvesicle-mediated transport
GO:0006886IEAInterProintracellular protein transport
GO:0009987IEAPLAZA Homologycellular processHOM03D000291

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005198IEAInterProstructural molecule activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030126IEAInterProCOPI vesicle coat
GO:0030117IEAInterPromembrane coat
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G62020 AT2G21390
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G62020
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G62020
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000291
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000291

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR011048Cytochrome cd1-nitrite reductase-like, haem d1 domain
IPR017986WD40-repeat-containing domain
IPR015943WD40/YVTN repeat-like-containing domain
IPR006692Coatomer, WD associated region
IPR010714Coatomer, alpha subunit, C-terminal
IPR019775WD40 repeat, conserved site

Mapman id Description
31.4cell.vesicle transport
No SignalP domains detected for this gene.