Interactive Phylogenetics Module

Gene Id
Zm00001d018657

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d018657 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2627.0 1419 100.0
Zm00007a00033969 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2551.9 1419 97.2
Zm00008a026675 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2438.7 1433 93.9
Sobic.002G008900 Sorghum bicolor HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2412.9 1429 91.0
Zm00007a00017366 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2389.0 1420 88.8
Zm00008a010545 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2332.0 1420 88.2
Seita.2G002900 Setaria italica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2256.1 1419 85.8
Pgl_GLEAN_10010211 Cenchrus americanus HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2131.3 1450 80.6
Sspon.01G0062950-1D Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2103.9 1387 84.6
Bradi1g59325 Brachypodium distachyon HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2069.3 1424 79.7
OB07G10690 Oryza brachyantha HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2062.3 1423 79.8
TraesCS2A02G260400 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2059.3 1427 78.3
TraesCS2D02G263300 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2059.3 1424 78.7
TRITD2Av1G146870 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2059.3 1427 78.3
PH01000549G0690 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2049.2 1426 78.3
TraesCS2B02G281600 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2045.8 1445 77.4
TRITD2Bv1G129320 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2044.2 1445 77.2
OsR498G0713385700.01 Oryza sativa ssp. indica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2032.7 1426 79.0
HORVU2Hr1G064000 Hordeum vulgare HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2002.6 1396 76.2
LP030466 Lolium perenne HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2002.6 1441 75.8
Zjn_sc00162.1.g00390.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1983.8 1419 76.9
Sspon.02G0043350-1B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1793.1 1296 78.2
p5.00_sc00151_p0024 Elaeis guineensis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1692.9 1471 63.5
Ma05_g01420 Musa acuminata HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1669.1 1432 62.6
Aco017576 Ananas comosus HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1622.8 1429 62.8
evm.TU.AsparagusV1_03.2056.V1.1 Asparagus officinalis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1593.2 1419 61.2
ASH_gene7576 Apostasia shenzhenica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1471.4 1425 55.8
PH01001526G0360 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1446.8 1168 69.2
Potri.017G092600 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1443.3 1416 56.1
PEQU_02399 Phalaenopsis equestris HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1442.6 1360 56.8
GSVIVG01011514001 Vitis vinifera HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1425.6 1400 55.6
Zm00001d007943 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1407.5 815 92.3
Zosma159g00220 Zostera marina HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1404.8 1428 55.7
ATR0064G076 Amborella trichopoda HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1392.9 1360 55.4
Spipo2G0087800 Spirodela polyrhiza HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1387.1 1362 54.6
LOC_Os07g01940 Oryza sativa ssp. japonica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1385.2 1031 77.4
Solyc03g059420.2 Solanum lycopersicum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1350.9 1400 53.9
PH01001640G0300 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1340.9 1412 59.6
AT5G15540 Arabidopsis thaliana HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1339.3 1415 51.9
Misin04G013100 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1318.1 759 93.0
CALSI_Maker00013263 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1248.8 992 65.5
Oropetium_20150105_22008 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1187.6 990 71.0
Pp3c15_14600 Physcomitrium patens HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1115.9 1386 46.3
Mapoly0011s0050 Marchantia polymorpha HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1114.4 1376 46.7
gene23322 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 1.7e-310 1068.5 1364 45.4
gene10784 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 8.4e-310 1066.2 1364 45.3
Sspon.02G0018920-1A Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 2.3e-299 1031.6 690 81.9
Misin04G013000 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 7.5e-258 893.6 560 86.6
PAB00017226 Picea abies HOM04x5M003226 ORTHO04x5M004921 7.1e-216 754.2 816 51.8
PAB00016463 Picea abies HOM04x5M003226 ORTHO04x5M004921 8.7e-214 747.3 848 49.5
Misin09G095400 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 5.3e-163 578.6 379 81.3
Sspon.02G0025880-2B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 1.2e-141 507.7 269 95.9
PAB00065273 Picea abies HOM04x5M003226 ORTHO04x5M004921 2.5e-88 330.5 341 51.0
Potri.004G119100 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 1.5e-69 268.1 506 36.8
PH01001526G0340 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 9.4e-51 205.7 230 59.1
MCO01G540 Micromonas commoda HOM04x5M003226 ORTHO04x5M004921 1.4e-49 201.8 392 33.7
Cre06.g278269 Chlamydomonas reinhardtii HOM04x5M003226 ORTHO04x5M004921 5.3e-46 189.9 1261 21.6
Oropetium_20150105_21970 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 2.0e-37 161.4 101 81.2
Zm00001d037074 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 1.9e-27 128.3 82 81.7
Zm00001d049603 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 8.6e-20 102.8 113 53.1
p5.00_sc00306_p0013 Elaeis guineensis HOM04x5M003226 ORTHO04x5M024371 1.8e-17 95.1 107 51.4
Potri.004G119300 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 4.1e-14 84.0 83 53.0
Zm00001d033293 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 4.6e-13 80.5 99 49.5
Aco008507 Ananas comosus HOM04x5M004897 ORTHO04x5M005756 3.6e-10 70.9 39 82.1
HORVU2Hr1G033240 Hordeum vulgare HOM04x5M003226 ORTHO04x5M004921 2.3e-09 68.2 52 61.5
p5.00_sc00306_p0017 Elaeis guineensis HOM04x5M003226 ORTHO04x5M024371 2.9e-07 61.2 69 50.7
Zm00001d046771 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 6.4e-07 60.1 43 76.7

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (3 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (6 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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