Gene: Potri.017G092600 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.017G092600
Transcript Identifier
Potri.017G092600.1
Gene Type
Coding gene
Location
Chr17 : 10960731-10974592 : negative

Family Information

Homologous gene family
HOM04x5M003226
(83 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M004921
(66 genes in 39 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPOPTR_0017s12820
aliaseugene3.00170480
idPotri.017G092600.v3.1
pacid37225116
tidPotri.017G092600.1.v3.1
tidPotri.017G092600.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IEA
InterProregulation of gene expression
GO:0007062
ISO
PLAZA Integrative Orthologysister chromatid cohesion AT5G15540
GO:0034508
ISO
PLAZA Integrative Orthologycentromere complex assembly AT5G15540
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G15540
GO:0051177
ISO
PLAZA Integrative Orthologymeiotic sister chromatid cohesion AT5G15540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
InterProchromatin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G15540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011989Armadillo-like helical
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR033031SCC2/Nipped-B family
IPR024986Sister chromatid cohesion C-terminal domain
IPR026003HEAT repeat associated with sister chromatid cohesion protein
IPR019786Zinc finger, PHD-type, conserved site
IPR019793Peroxidases heam-ligand binding site
IPR019787Zinc finger, PHD-finger
IPR001841Zinc finger, RING-type
IPR001965Zinc finger, PHD-type
IPR016024Armadillo-type fold
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
13.3.5.2.1Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin loading.adherin (SCC2)