Interactive Phylogenetics Module

Gene Id
Pgl_GLEAN_10007040

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pgl_GLEAN_10007040 Cenchrus americanus HOM04x5M004591 ORTHO04x5M005491 1.8e-305 1050.4 532 100.0
Seita.2G382200 Setaria italica HOM04x5M004591 ORTHO04x5M005491 1.5e-272 941.0 561 87.7
Sobic.008G125100 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 8.8e-236 818.9 571 76.0
Misin15G141500 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 2.6e-235 817.4 568 76.6
Misin14G119200 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.6e-232 808.1 569 76.3
Zm00001d023817 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 2.5e-230 800.8 565 75.4
Zm00008a036741 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 7.2e-230 799.3 565 75.4
Zm00008a012364 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 5.2e-228 793.1 563 76.0
Sspon.02G0043910-3D Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 9.8e-227 788.9 596 72.3
Bradi4g01215 Brachypodium distachyon HOM04x5M004591 ORTHO04x5M005491 9.5e-222 772.3 565 71.3
Zjn_sc00088.1.g00680.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004591 ORTHO04x5M005491 5.2e-220 766.5 552 73.9
Zm00001d041625 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 1.0e-215 752.3 582 71.6
TRITD5Bv1G008000 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 1.2e-211 738.8 564 70.4
TraesCS5B02G022900 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 6.4e-210 733.0 566 69.8
OB12G26130 Oryza brachyantha HOM04x5M004591 ORTHO04x5M005491 7.8e-208 726.1 564 67.7
LOC_Os12g42870 Oryza sativa ssp. japonica HOM04x5M004591 ORTHO04x5M005491 6.6e-207 723.0 517 73.7
HORVU5Hr1G006850 Hordeum vulgare HOM04x5M004591 ORTHO04x5M005491 2.6e-203 711.1 537 70.8
Oropetium_20150105_26144 Oropetium thomaeum HOM04x5M004591 ORTHO04x5M005491 3.2e-201 704.1 535 71.2
TRITD5Av1G009960 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 4.3e-190 667.2 507 69.6
Sspon.02G0043910-2C Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 1.3e-175 619.0 567 63.0
TraesCS5A02G025100 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 4.3e-174 614.0 562 60.9
Aco010714 Ananas comosus HOM04x5M004591 ORTHO04x5M005491 9.9e-163 576.2 526 60.1
CALSI_Maker00046052 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 2.6e-155 551.6 554 56.3
Ma10_g14640 Musa acuminata HOM04x5M004591 ORTHO04x5M005491 4.3e-150 534.3 561 54.5
CALSI_Maker00004256 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 4.2e-145 517.7 517 55.3
Zosma222g00340 Zostera marina HOM04x5M004591 ORTHO04x5M005491 6.7e-143 510.4 539 51.6
PEQU_13280 Phalaenopsis equestris HOM04x5M004591 ORTHO04x5M005491 7.4e-142 506.9 525 53.3
TraesCS5D02G031500 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 1.8e-140 502.3 343 76.7
p5.00_sc00001_p0333 Elaeis guineensis HOM04x5M004591 ORTHO04x5M005491 2.2e-138 495.4 520 55.2
ATR0661G386 Amborella trichopoda HOM04x5M004591 ORTHO04x5M005491 2.6e-134 481.9 522 51.3
ASH_gene13367 Apostasia shenzhenica HOM04x5M004591 ORTHO04x5M005491 3.2e-129 464.9 535 47.7
GSVIVG01028720001 Vitis vinifera HOM04x5M004591 ORTHO04x5M005491 3.2e-129 464.9 524 48.3
OsR498G1222137800.01 Oryza sativa ssp. indica HOM04x5M004591 ORTHO04x5M005491 9.4e-129 463.4 351 71.2
evm.TU.AsparagusV1_01.2651.V1.1 Asparagus officinalis HOM04x5M004591 ORTHO04x5M005491 2.0e-126 455.7 540 47.8
Potri.015G022400 Populus trichocarpa HOM04x5M004591 ORTHO04x5M005491 5.7e-126 454.1 448 53.6
Zm00007a00028909 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 9.7e-126 453.4 311 78.1
Solyc06g051900.2 Solanum lycopersicum HOM04x5M004591 ORTHO04x5M005491 2.1e-120 435.6 522 45.6
AT5G41480 Arabidopsis thaliana HOM04x5M004591 ORTHO04x5M005491 4.4e-118 427.9 538 47.0
Sspon.02G0043910-1T Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 7.2e-113 410.6 433 56.6
Mapoly0084s0006 Marchantia polymorpha HOM04x5M004591 ORTHO04x5M005491 1.7e-101 372.9 556 42.3
PH01000955G0520 Phyllostachys edulis HOM04x5M004591 ORTHO04x5M005491 8.6e-98 360.5 433 51.5
Spipo14G0021500 Spirodela polyrhiza HOM04x5M004591 ORTHO04x5M005491 7.3e-97 357.5 325 57.5
Pp3c1_19310 Physcomitrium patens HOM04x5M004591 ORTHO04x5M005491 6.4e-93 344.4 573 37.3
gene32722 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 1.6e-91 339.7 518 39.6
gene9611 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 2.0e-91 339.3 518 39.4
CALSI_Maker00048144 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 7.5e-86 320.9 370 50.5
LP018771 Lolium perenne HOM04x5M004591 ORTHO04x5M005491 1.7e-85 319.7 256 66.8
Zm00007a00021750 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 2.9e-69 265.8 189 74.6
CALSI_Maker00020637 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 1.7e-58 229.9 250 54.0
Zm00007a00021748 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 1.6e-48 196.8 122 82.0
Cre03.g176800 Chlamydomonas reinhardtii HOM04x5M004591 ORTHO04x5M005491 1.2e-43 180.6 397 33.0
PAB00014791 Picea abies HOM04x5M004591 ORTHO04x5M005491 3.4e-38 162.5 196 46.4
MisinT096700 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.0e-26 124.4 69 85.5
MCO16G056 Micromonas commoda HOM04x5M004591 ORTHO04x5M005491 2.3e-26 123.2 209 35.9
gene25554 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 5.7e-25 118.6 302 30.1
gene1317 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 7.4e-25 118.2 305 30.5
Mapoly0010s0086 Marchantia polymorpha HOM04x5M002239 ORTHO04x5M002625 6.3e-24 115.2 324 29.3
ATR0559G016 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 8.2e-24 114.8 330 29.1
p5.00_sc00099_p0002 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 4.1e-23 112.5 346 30.3
gene850 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.1e-23 112.5 303 30.7
gene852 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.1e-23 112.5 303 30.7
gene7721 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 6.9e-23 111.7 305 30.2
Sobic.008G177850 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 9.1e-23 111.3 70 72.9
Zosma162g00210 Zostera marina HOM04x5M002239 ORTHO04x5M002625 1.2e-22 110.9 338 28.4
CALSI_Maker00039217 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.5e-22 110.5 380 28.7
Spipo6G0074700 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 2.6e-22 109.8 350 28.9
Pp3c24_9100 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 1.7e-21 107.1 314 29.6
gene16703 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.2e-21 106.7 312 28.2
Pp3c23_670 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 5.0e-21 105.5 307 28.3
Potri.016G041800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 6.5e-21 105.1 347 28.8
HORVU4Hr1G089590 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 8.5e-21 104.8 381 26.0
MCO10G081 Micromonas commoda HOM04x5M002239 ORTHO04x5M002625 8.5e-21 104.8 315 28.3
GSVIVG01033555001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 8.5e-21 104.8 361 28.0
Ma09_g03530 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 1.4e-20 104.0 321 28.0
TraesCS4B02G392600 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.4e-20 104.0 349 26.1
TraesCSU02G034000 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.9e-20 103.6 346 26.3
Zosma129g00040 Zostera marina HOM04x5M002239 ORTHO04x5M002625 1.9e-20 103.6 339 28.6
evm.TU.AsparagusV1_08.3611.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 2.5e-20 103.2 324 29.0
MisinT096800 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 2.5e-20 103.2 69 73.9
Ma01_g05040 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 3.2e-20 102.8 356 27.2
Potri.008G060600 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 3.2e-20 102.8 380 27.4
gene29954 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 3.2e-20 102.8 306 27.8
Sspon.02G0053310-1C Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 3.2e-20 102.8 168 41.7
Potri.006G045400 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 4.2e-20 102.4 325 28.0
TRITD5Av1G257300 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 4.2e-20 102.4 319 27.3
Bradi1g77850 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 7.2e-20 101.7 493 23.9
PAB00036996 Picea abies HOM04x5M004591 ORTHO04x5M005491 7.2e-20 101.7 85 56.5
Seita.9G571100 Setaria italica HOM04x5M002239 ORTHO04x5M002625 7.2e-20 101.7 203 32.5
Sspon.01G0000640-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 7.2e-20 101.7 137 38.7
p5.00_sc00032_p0096 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 1.6e-19 100.5 329 28.3
Sspon.01G0000640-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.6e-19 100.5 487 24.4
GSVIVG01016464001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 1.6e-19 100.5 311 28.9
ASH_gene15508 Apostasia shenzhenica HOM04x5M002239 ORTHO04x5M002625 2.1e-19 100.1 150 38.0
Solyc05g052920.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 2.1e-19 100.1 355 27.0
Sspon.01G0000640-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.1e-19 100.1 487 24.2
Aco016849 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 2.7e-19 99.8 346 27.7
AT5G05980 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 2.7e-19 99.8 335 28.1
LP000959 Lolium perenne HOM04x5M002239 ORTHO04x5M002625 3.6e-19 99.4 398 26.9
LOC_Os03g02030 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 6.1e-19 98.6 303 27.4
OsR498G0305106600.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 6.1e-19 98.6 303 27.4
OB03G10890 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 1.0e-18 97.8 185 33.0
TraesCS1A02G173700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.0e-18 97.8 383 26.4
Oropetium_20150105_21336 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 1.4e-18 97.4 185 31.9
Spipo27G0015800 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 1.4e-18 97.4 343 28.6
Zjn_sc00092.1.g01510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002239 ORTHO04x5M002625 1.4e-18 97.4 135 37.0
TraesCS1B02G190700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.8e-18 97.1 328 27.1
TRITD1Bv1G112470 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.8e-18 97.1 328 27.1
Aco002379 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 2.3e-18 96.7 348 29.3
ATR0721G042 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 2.3e-18 96.7 309 27.8
Potri.010G197800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 2.3e-18 96.7 153 37.9
Ma06_g35910 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 3.0e-18 96.3 149 38.3
evm.TU.AsparagusV1_05.14.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 3.9e-18 95.9 330 28.8
CALSI_Maker00006600 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 3.9e-18 95.9 51 80.4
Misin02G507900 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 6.7e-18 95.1 299 28.1
Misin01G518000 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 8.8e-18 94.7 127 38.6
OB10G22100 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 8.8e-18 94.7 365 27.1
Sobic.001G535500 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 8.8e-18 94.7 127 37.8
Zm00008a004043 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 8.8e-18 94.7 304 27.3
AT3G55630 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 1.1e-17 94.4 305 28.9
Oropetium_20150105_09415 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 1.1e-17 94.4 308 26.3
AT3G10160 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 1.5e-17 94.0 243 30.5
TRITD1Av1G111900 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 2.0e-17 93.6 183 33.3
CALSI_Maker00015974 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 3.3e-17 92.8 173 33.5
Seita.9G200900 Setaria italica HOM04x5M002239 ORTHO04x5M002625 4.4e-17 92.4 128 37.5
Zm00008a036205 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 4.4e-17 92.4 118 39.0
Bradi3g30210 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 7.4e-17 91.7 443 25.1
PEQU_09314 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 9.7e-17 91.3 339 27.1
Misin01G184500 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 2.2e-16 90.1 118 39.8
OsR498G1019001800.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 2.2e-16 90.1 128 36.7
Sspon.01G0020910-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.8e-15 87.0 118 39.0
Sspon.01G0020910-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.8e-15 87.0 118 39.0
TraesCS1D02G165100 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 4.1e-15 85.9 129 37.2
Pgl_GLEAN_10021628 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 1.2e-14 84.3 148 35.1
CALSI_Maker00013977 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 3.4e-14 82.8 183 30.1
Sobic.008G137200 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 2.9e-13 79.7 52 71.2
Solyc04g016550.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 5.0e-13 79.0 223 30.5
Sspon.01G0020910-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 5.5e-12 75.5 298 24.8
CALSI_Maker00045140 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 2.7e-11 73.2 157 29.3
Sspon.02G0031850-1T Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 8.0e-11 71.6 168 38.1
Sspon.01G0020910-4D Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.0e-10 71.2 118 34.7
PAB00032154 Picea abies HOM04x5M004591 ORTHO04x5M005491 3.0e-10 69.7 64 46.9
Zm00007a00051220 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 3.0e-10 69.7 112 34.8
Misin02G171600 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 4.4e-09 65.9 103 34.0
PAB00014792 Picea abies HOM04x5M004591 ORTHO04x5M005491 7.4e-09 65.1 123 33.3
Sobic.001G201900 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 7.4e-09 65.1 102 35.3
LOC_Os10g35940 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 9.7e-09 64.7 112 32.1
Zm00007a00051487 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 1.7e-08 63.9 101 34.7
gene35885 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.8e-08 63.2 57 45.6
Zm00001d032529 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 2.8e-08 63.2 101 34.7
Cre05.g239100 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 6.3e-08 62.0 52 50.0
Cre05.g239067 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 6.3e-08 62.0 52 50.0
Zm00007a00051700 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 7.0e-07 58.5 109 33.0

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (9 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (8 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (3 genes)
Picea abies (4 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (12 genes)
Selaginella moellendorffii (10 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (5 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (8 genes)
Triticum turgidum (5 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (4 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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