Interactive Phylogenetics Module

Gene Id
LOC_Os12g42870

Contact Settings

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Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os12g42870 Oryza sativa ssp. japonica HOM04x5M004591 ORTHO04x5M005491 3.7e-292 1006.1 511 100.0
OB12G26130 Oryza brachyantha HOM04x5M004591 ORTHO04x5M005491 5.3e-262 906.0 510 90.6
Bradi4g01215 Brachypodium distachyon HOM04x5M004591 ORTHO04x5M005491 6.9e-230 799.3 519 79.2
Seita.2G382200 Setaria italica HOM04x5M004591 ORTHO04x5M005491 2.7e-226 787.3 516 78.7
TraesCS5B02G022900 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 7.4e-224 779.2 517 77.6
Sobic.008G125100 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 1.3e-223 778.5 513 78.9
Misin14G119200 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 6.3e-223 776.2 514 78.2
Misin15G141500 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 8.2e-223 775.8 512 77.5
TRITD5Bv1G008000 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 2.0e-221 771.2 517 77.4
Zm00001d023817 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 1.6e-218 761.5 512 76.8
Zm00008a036741 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 6.1e-218 759.6 515 76.1
Sspon.02G0043910-3D Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 3.7e-215 750.4 541 73.9
Zjn_sc00088.1.g00680.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004591 ORTHO04x5M005491 1.4e-214 748.4 513 75.4
Zm00008a012364 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 1.8e-214 748.0 515 76.1
Pgl_GLEAN_10007040 Cenchrus americanus HOM04x5M004591 ORTHO04x5M005491 6.3e-207 723.0 517 73.7
Zm00001d041625 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 3.2e-203 710.7 534 71.7
Oropetium_20150105_26144 Oropetium thomaeum HOM04x5M004591 ORTHO04x5M005491 1.2e-202 708.8 519 72.3
TRITD5Av1G009960 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 2.7e-202 707.6 466 77.9
HORVU5Hr1G006850 Hordeum vulgare HOM04x5M004591 ORTHO04x5M005491 1.3e-188 662.1 519 68.4
TraesCS5A02G025100 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 5.6e-187 656.8 516 68.4
Aco010714 Ananas comosus HOM04x5M004591 ORTHO04x5M005491 3.1e-185 651.0 506 68.0
CALSI_Maker00046052 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 1.1e-171 605.9 542 60.1
Ma10_g14640 Musa acuminata HOM04x5M004591 ORTHO04x5M005491 5.2e-169 597.0 512 61.9
OsR498G1222137800.01 Oryza sativa ssp. indica HOM04x5M004591 ORTHO04x5M005491 1.9e-166 588.6 295 99.3
Sspon.02G0043910-2C Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 2.1e-165 585.1 512 64.5
PEQU_13280 Phalaenopsis equestris HOM04x5M004591 ORTHO04x5M005491 8.6e-164 579.7 508 59.6
Zosma222g00340 Zostera marina HOM04x5M004591 ORTHO04x5M005491 4.7e-162 573.9 511 59.7
p5.00_sc00001_p0333 Elaeis guineensis HOM04x5M004591 ORTHO04x5M005491 5.6e-155 550.4 513 59.3
ATR0661G386 Amborella trichopoda HOM04x5M004591 ORTHO04x5M005491 1.6e-154 548.9 511 57.3
GSVIVG01028720001 Vitis vinifera HOM04x5M004591 ORTHO04x5M005491 3.2e-150 534.6 510 54.9
TraesCS5D02G031500 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 3.6e-146 521.2 299 86.6
evm.TU.AsparagusV1_01.2651.V1.1 Asparagus officinalis HOM04x5M004591 ORTHO04x5M005491 3.4e-144 514.6 506 54.3
CALSI_Maker00004256 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 2.9e-143 511.5 534 52.6
Potri.015G022400 Populus trichocarpa HOM04x5M004591 ORTHO04x5M005491 2.9e-143 511.5 433 59.8
Solyc06g051900.2 Solanum lycopersicum HOM04x5M004591 ORTHO04x5M005491 1.2e-141 506.1 508 52.4
AT5G41480 Arabidopsis thaliana HOM04x5M004591 ORTHO04x5M005491 7.6e-136 486.9 514 52.5
ASH_gene13367 Apostasia shenzhenica HOM04x5M004591 ORTHO04x5M005491 1.6e-133 479.2 536 49.8
Zm00007a00028909 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 7.9e-125 450.3 266 84.2
Mapoly0084s0006 Marchantia polymorpha HOM04x5M004591 ORTHO04x5M005491 1.6e-117 426.0 511 46.2
Sspon.02G0043910-1T Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 3.3e-115 418.3 433 57.0
Spipo14G0021500 Spirodela polyrhiza HOM04x5M004591 ORTHO04x5M005491 2.8e-114 415.2 300 67.7
gene32722 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 4.2e-110 401.4 505 45.0
Pp3c1_19310 Physcomitrium patens HOM04x5M004591 ORTHO04x5M005491 3.6e-109 398.3 531 42.0
gene9611 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 3.6e-109 398.3 505 44.8
PH01000955G0520 Phyllostachys edulis HOM04x5M004591 ORTHO04x5M005491 1.6e-101 372.9 441 51.2
CALSI_Maker00048144 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 7.5e-83 310.8 413 45.8
LP018771 Lolium perenne HOM04x5M004591 ORTHO04x5M005491 6.3e-82 307.8 253 65.6
Zm00007a00021750 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 2.7e-80 302.4 189 79.9
CALSI_Maker00020637 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 1.1e-60 237.3 245 54.3
Cre03.g176800 Chlamydomonas reinhardtii HOM04x5M004591 ORTHO04x5M005491 2.9e-58 229.2 399 37.6
PAB00014791 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.7e-39 166.8 162 53.7
Zm00007a00021748 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 3.6e-37 159.1 76 97.4
MCO16G056 Micromonas commoda HOM04x5M004591 ORTHO04x5M005491 9.9e-35 151.0 240 38.3
gene852 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.6e-32 142.1 513 28.3
p5.00_sc00099_p0002 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 6.0e-32 141.7 370 32.2
gene25554 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 6.0e-32 141.7 487 28.3
gene7721 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 7.9e-32 141.4 516 29.1
gene850 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 1.0e-31 141.0 516 28.9
CALSI_Maker00039217 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.3e-31 140.6 374 32.1
gene1317 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 3.0e-31 139.4 490 27.3
ATR0559G016 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 9.6e-30 134.4 359 30.4
Mapoly0010s0086 Marchantia polymorpha HOM04x5M002239 ORTHO04x5M002625 9.6e-30 134.4 395 31.1
Zosma162g00210 Zostera marina HOM04x5M002239 ORTHO04x5M002625 6.2e-29 131.7 374 29.7
Zosma129g00040 Zostera marina HOM04x5M002239 ORTHO04x5M002625 6.2e-29 131.7 355 30.4
gene16703 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 1.1e-28 131.0 340 31.2
p5.00_sc00032_p0096 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 2.4e-28 129.8 378 30.7
Spipo6G0074700 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 4.0e-28 129.0 380 29.5
evm.TU.AsparagusV1_08.3611.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 5.3e-28 128.6 364 29.9
gene29954 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 5.3e-28 128.6 340 30.6
Ma09_g03530 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 6.9e-28 128.3 352 30.1
LOC_Os03g02030 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 6.9e-28 128.3 511 25.8
OsR498G0305106600.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 6.9e-28 128.3 510 25.3
TRITD5Av1G257300 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 6.9e-28 128.3 506 25.9
TraesCSU02G034000 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 9.0e-28 127.9 337 28.8
Aco016849 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 2.0e-27 126.7 365 30.1
OB03G10890 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 2.6e-27 126.3 504 26.2
ASH_gene15508 Apostasia shenzhenica HOM04x5M002239 ORTHO04x5M002625 5.8e-27 125.2 353 30.3
Potri.006G045400 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 7.6e-27 124.8 356 30.1
GSVIVG01033555001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 7.6e-27 124.8 406 29.1
MisinT096700 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.3e-26 124.0 69 85.5
TraesCS4B02G392600 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.3e-26 124.0 327 28.4
TraesCS1B02G190700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 2.9e-26 122.9 367 29.4
TRITD1Bv1G112470 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 2.9e-26 122.9 367 29.4
Pp3c23_670 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 3.8e-26 122.5 336 30.4
TraesCS1A02G173700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 3.8e-26 122.5 367 29.4
Zjn_sc00092.1.g01510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002239 ORTHO04x5M002625 4.9e-26 122.1 235 31.1
HORVU4Hr1G089590 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 1.1e-25 120.9 339 28.6
TRITD1Av1G111900 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.1e-25 120.9 371 29.1
Pp3c24_9100 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 1.4e-25 120.6 331 30.5
AT5G05980 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 2.4e-25 119.8 360 29.2
Ma06_g35910 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 3.2e-25 119.4 366 29.8
Oropetium_20150105_09415 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 5.4e-25 118.6 497 25.8
MCO10G081 Micromonas commoda HOM04x5M002239 ORTHO04x5M002625 7.1e-25 118.2 196 37.8
Potri.008G060600 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 7.1e-25 118.2 347 27.4
LP000959 Lolium perenne HOM04x5M002239 ORTHO04x5M002625 1.2e-24 117.5 366 28.1
Ma01_g05040 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 1.2e-24 117.5 193 36.3
GSVIVG01016464001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 1.2e-24 117.5 325 28.9
Aco002379 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 1.6e-24 117.1 359 29.8
Sspon.01G0020910-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 4.6e-24 115.5 322 29.8
TraesCS1D02G165100 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 7.9e-24 114.8 368 30.2
ATR0721G042 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 1.0e-23 114.4 167 37.7
Seita.9G571100 Setaria italica HOM04x5M002239 ORTHO04x5M002625 1.8e-23 113.6 167 35.3
Sspon.01G0000640-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.8e-23 113.6 167 37.7
Sspon.01G0000640-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.3e-23 113.2 167 37.1
Bradi1g77850 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 3.0e-23 112.8 179 34.6
OsR498G1019001800.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 3.0e-23 112.8 186 34.9
Potri.010G197800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 3.0e-23 112.8 208 33.2
Sobic.001G535500 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 3.0e-23 112.8 167 36.5
Solyc05g052920.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 3.0e-23 112.8 167 37.1
Bradi3g30210 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 5.1e-23 112.1 519 25.2
Seita.9G200900 Setaria italica HOM04x5M002239 ORTHO04x5M002625 5.1e-23 112.1 167 36.5
Misin01G518000 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 8.7e-23 111.3 167 36.5
Misin02G507900 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 1.1e-22 110.9 157 38.2
OB10G22100 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 1.1e-22 110.9 202 34.7
Spipo27G0015800 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 1.1e-22 110.9 195 35.4
Zm00008a036205 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 1.1e-22 110.9 157 36.9
evm.TU.AsparagusV1_05.14.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 1.9e-22 110.2 210 34.3
AT3G55630 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 2.5e-22 109.8 167 37.7
Potri.016G041800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 2.5e-22 109.8 180 36.7
AT3G10160 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 5.6e-22 108.6 167 36.5
Misin01G184500 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 5.6e-22 108.6 154 37.7
Sobic.008G177850 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 9.6e-22 107.8 70 67.1
Zm00008a004043 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 9.6e-22 107.8 157 36.9
CALSI_Maker00013977 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.6e-21 107.1 388 26.5
Pgl_GLEAN_10021628 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 1.6e-21 107.1 352 28.4
PEQU_09314 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 2.8e-21 106.3 200 33.0
Sspon.01G0020910-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.8e-21 106.3 158 37.3
Sspon.01G0000640-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 6.2e-21 105.1 157 36.3
PAB00036996 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.1e-20 104.4 85 57.6
PAB00049973 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.1e-20 104.4 80 66.2
MisinT096800 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 2.4e-20 103.2 69 73.9
Sspon.02G0053310-1C Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 7.6e-19 98.2 68 69.1
CALSI_Maker00015974 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 2.9e-18 96.3 394 28.4
Oropetium_20150105_21336 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 4.9e-18 95.5 127 37.0
Solyc04g016550.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 1.4e-17 94.0 168 36.9
LOC_Os10g35940 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 7.1e-17 91.7 366 27.6
Sspon.01G0020910-4D Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.6e-16 90.5 154 33.8
Sspon.01G0020910-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 7.9e-16 88.2 149 34.2
Cre05.g239100 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 1.0e-15 87.8 188 30.9
Cre05.g239067 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 1.0e-15 87.8 188 30.9
CALSI_Maker00006600 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 4.3e-14 82.4 43 83.7
Zm00001d048514 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 5.3e-12 75.5 503 24.9
Sobic.001G201900 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 6.9e-12 75.1 154 30.5
Zm00007a00051220 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 6.9e-12 75.1 140 29.3
HORVU1Hr1G045670 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 2.2e-10 70.1 274 27.4
PAB00014792 Picea abies HOM04x5M004591 ORTHO04x5M005491 2.9e-10 69.7 120 35.8
CALSI_Maker00045140 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.1e-09 67.8 73 43.8
Misin02G171600 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 1.1e-09 67.8 103 34.0
gene35885 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 3.2e-09 66.2 70 45.7
Sspon.02G0031850-1T Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 4.2e-09 65.9 166 38.0
Zm00007a00051487 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 4.2e-09 65.9 101 34.7
PEQU_08658 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 5.5e-09 65.5 260 28.1
Zm00001d032529 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 7.2e-09 65.1 101 34.7
Zm00007a00051700 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 7.2e-09 65.1 150 30.0
PAB00032154 Picea abies HOM04x5M004591 ORTHO04x5M005491 9.3e-09 64.7 56 51.8
Sobic.008G137200 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 3.5e-08 62.8 42 69.0
PH01000012G0660 Phyllostachys edulis HOM04x5M002239 ORTHO04x5M002625 6.1e-08 62.0 97 36.1
Pgl_GLEAN_10037820 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 2.3e-07 60.1 78 38.5

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (9 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (8 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (3 genes)
Picea abies (5 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (12 genes)
Selaginella moellendorffii (10 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (5 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (8 genes)
Triticum turgidum (5 genes)
Vitis vinifera (3 genes)
Zea mays B73 (4 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (4 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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