Interactive Phylogenetics Module

Gene Id
AT5G41480

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G41480 Arabidopsis thaliana HOM04x5M004591 ORTHO04x5M005491 1.9e-294 1013.8 531 100.0
GSVIVG01028720001 Vitis vinifera HOM04x5M004591 ORTHO04x5M005491 7.1e-161 570.1 519 59.9
Potri.015G022400 Populus trichocarpa HOM04x5M004591 ORTHO04x5M005491 7.9e-160 566.6 466 64.6
Ma10_g14640 Musa acuminata HOM04x5M004591 ORTHO04x5M005491 1.8e-148 528.9 534 54.7
PEQU_13280 Phalaenopsis equestris HOM04x5M004591 ORTHO04x5M005491 6.9e-148 526.9 514 56.6
Solyc06g051900.2 Solanum lycopersicum HOM04x5M004591 ORTHO04x5M005491 1.0e-146 523.1 529 55.0
Aco010714 Ananas comosus HOM04x5M004591 ORTHO04x5M005491 5.3e-140 500.7 518 52.9
Zosma222g00340 Zostera marina HOM04x5M004591 ORTHO04x5M005491 6.9e-140 500.4 513 54.0
ATR0661G386 Amborella trichopoda HOM04x5M004591 ORTHO04x5M005491 1.2e-139 499.6 521 54.5
CALSI_Maker00046052 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 1.2e-139 499.6 556 51.6
Misin15G141500 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.2e-136 489.6 540 52.4
Misin14G119200 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.8e-135 485.7 541 52.1
Sobic.008G125100 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 9.7e-134 479.9 525 52.4
Bradi4g01215 Brachypodium distachyon HOM04x5M004591 ORTHO04x5M005491 2.4e-132 475.3 543 50.1
LOC_Os12g42870 Oryza sativa ssp. japonica HOM04x5M004591 ORTHO04x5M005491 3.1e-132 474.9 514 52.5
Seita.2G382200 Setaria italica HOM04x5M004591 ORTHO04x5M005491 3.1e-132 474.9 553 50.1
TraesCS5B02G022900 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 5.3e-132 474.2 436 57.8
Zm00008a036741 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 2.0e-131 472.2 540 50.7
Sspon.02G0043910-3D Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 5.9e-131 470.7 576 49.1
Zm00001d023817 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 1.0e-130 469.9 540 50.6
Zm00008a012364 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 1.1e-129 466.5 536 51.1
OB12G26130 Oryza brachyantha HOM04x5M004591 ORTHO04x5M005491 1.4e-129 466.1 512 51.4
TRITD5Bv1G008000 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 2.1e-128 462.2 460 55.7
p5.00_sc00001_p0333 Elaeis guineensis HOM04x5M004591 ORTHO04x5M005491 1.5e-126 456.1 526 51.5
evm.TU.AsparagusV1_01.2651.V1.1 Asparagus officinalis HOM04x5M004591 ORTHO04x5M005491 2.6e-123 445.3 529 48.4
TRITD5Av1G009960 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 5.9e-123 444.1 436 55.7
Zjn_sc00088.1.g00680.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004591 ORTHO04x5M005491 3.8e-122 441.4 520 50.4
Zm00001d041625 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 1.4e-121 439.5 555 48.5
Pgl_GLEAN_10007040 Cenchrus americanus HOM04x5M004591 ORTHO04x5M005491 5.9e-115 417.5 538 47.0
Oropetium_20150105_26144 Oropetium thomaeum HOM04x5M004591 ORTHO04x5M005491 6.5e-114 414.1 530 48.3
ASH_gene13367 Apostasia shenzhenica HOM04x5M004591 ORTHO04x5M005491 5.2e-111 404.4 550 44.4
CALSI_Maker00004256 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 5.2e-111 404.4 553 43.6
gene32722 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 3.1e-108 395.2 475 48.8
Mapoly0084s0006 Marchantia polymorpha HOM04x5M004591 ORTHO04x5M005491 7.0e-108 394.0 536 43.8
gene9611 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 7.0e-108 394.0 475 48.8
TraesCS5A02G025100 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 5.9e-107 391.0 527 44.6
Spipo14G0021500 Spirodela polyrhiza HOM04x5M004591 ORTHO04x5M005491 1.6e-104 382.9 318 61.9
HORVU5Hr1G006850 Hordeum vulgare HOM04x5M004591 ORTHO04x5M005491 1.3e-101 373.2 548 41.6
Pp3c1_19310 Physcomitrium patens HOM04x5M004591 ORTHO04x5M005491 2.7e-99 365.5 546 42.3
TraesCS5D02G031500 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 8.6e-98 360.5 310 60.3
Sspon.02G0043910-2C Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 7.2e-97 357.5 536 42.5
OsR498G1222137800.01 Oryza sativa ssp. indica HOM04x5M004591 ORTHO04x5M005491 6.3e-93 344.4 295 61.4
Zm00007a00028909 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 2.5e-81 305.8 293 57.7
CALSI_Maker00048144 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 8.6e-66 254.2 383 40.7
Sspon.02G0043910-1T Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 3.0e-58 229.2 431 38.1
Cre03.g176800 Chlamydomonas reinhardtii HOM04x5M004591 ORTHO04x5M005491 8.4e-53 211.1 508 32.9
CALSI_Maker00020637 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 5.8e-46 188.3 243 44.9
Zm00007a00021750 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 2.9e-45 186.0 187 56.7
PAB00014791 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.4e-39 167.2 169 50.9
LP018771 Lolium perenne HOM04x5M004591 ORTHO04x5M005491 6.9e-39 164.9 245 40.8
gene1317 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 6.9e-39 164.9 482 29.9
gene25554 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 3.4e-38 162.5 485 30.1
MCO16G056 Micromonas commoda HOM04x5M004591 ORTHO04x5M005491 1.9e-33 146.7 233 38.6
LOC_Os03g02030 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 2.5e-33 146.4 532 28.4
OsR498G0305106600.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 2.5e-33 146.4 532 28.2
p5.00_sc00099_p0002 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 5.6e-33 145.2 347 31.4
HORVU4Hr1G089590 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 5.6e-33 145.2 498 28.5
gene16703 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 9.6e-33 144.4 337 32.9
gene29954 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 1.6e-32 143.7 337 32.9
TraesCSU02G034000 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.6e-32 143.7 489 28.2
TraesCS4B02G392600 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.6e-32 143.7 489 28.2
TRITD5Av1G257300 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 2.8e-32 142.9 489 28.2
PH01000955G0520 Phyllostachys edulis HOM04x5M004591 ORTHO04x5M005491 8.2e-32 141.4 261 37.9
Sspon.01G0000640-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 8.2e-32 141.4 490 27.8
Sspon.01G0000640-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 3.1e-31 139.4 490 27.3
CALSI_Maker00039217 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 4.0e-31 139.0 372 29.6
OB03G10890 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 4.0e-31 139.0 526 27.4
Misin02G507900 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 9.0e-31 137.9 490 27.3
Seita.9G571100 Setaria italica HOM04x5M002239 ORTHO04x5M002625 9.0e-31 137.9 489 27.4
p5.00_sc00032_p0096 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 1.5e-30 137.1 368 29.9
Sobic.001G535500 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 1.5e-30 137.1 490 26.9
Ma09_g03530 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 3.4e-30 136.0 343 31.2
OB10G22100 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 3.4e-30 136.0 496 29.6
ATR0559G016 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 4.5e-30 135.6 184 39.7
ATR0721G042 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 4.5e-30 135.6 356 31.2
Zosma129g00040 Zostera marina HOM04x5M002239 ORTHO04x5M002625 4.5e-30 135.6 377 30.8
Oropetium_20150105_09415 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 5.8e-30 135.2 478 28.2
Potri.006G045400 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 5.8e-30 135.2 403 28.8
Spipo6G0074700 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 5.8e-30 135.2 378 29.6
Ma01_g05040 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 7.6e-30 134.8 357 30.3
Misin01G518000 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 7.6e-30 134.8 490 27.1
Bradi1g77850 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 1.0e-29 134.4 505 27.1
Aco016849 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 1.7e-29 133.7 509 27.1
MCO10G081 Micromonas commoda HOM04x5M002239 ORTHO04x5M002625 2.9e-29 132.9 379 29.6
Sspon.01G0020910-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 3.8e-29 132.5 338 31.4
TraesCS1B02G190700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 4.9e-29 132.1 492 27.8
TRITD1Bv1G112470 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 4.9e-29 132.1 492 27.8
TraesCS1A02G173700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 6.5e-29 131.7 492 27.6
Solyc05g052920.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 8.4e-29 131.3 346 30.3
gene850 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 8.4e-29 131.3 336 31.0
gene852 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 8.4e-29 131.3 336 31.0
ASH_gene15508 Apostasia shenzhenica HOM04x5M002239 ORTHO04x5M002625 1.1e-28 131.0 363 30.6
gene7721 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 1.4e-28 130.6 336 30.7
TRITD1Av1G111900 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.4e-28 130.6 349 30.4
Zm00007a00021748 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 1.4e-28 130.6 102 59.8
Zosma162g00210 Zostera marina HOM04x5M002239 ORTHO04x5M002625 1.4e-28 130.6 363 30.6
Potri.008G060600 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 2.5e-28 129.8 356 28.9
evm.TU.AsparagusV1_08.3611.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 3.2e-28 129.4 519 26.0
Zm00008a036205 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 3.2e-28 129.4 490 28.0
LP000959 Lolium perenne HOM04x5M002239 ORTHO04x5M002625 4.2e-28 129.0 330 30.6
Zjn_sc00092.1.g01510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002239 ORTHO04x5M002625 4.2e-28 129.0 172 39.5
Seita.9G200900 Setaria italica HOM04x5M002239 ORTHO04x5M002625 5.5e-28 128.6 503 27.4
Potri.010G197800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 1.2e-27 127.5 357 29.1
Zm00008a004043 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 1.2e-27 127.5 329 30.7
Ma06_g35910 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 2.7e-27 126.3 354 29.4
GSVIVG01016464001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 2.7e-27 126.3 519 27.0
OsR498G1019001800.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 3.5e-27 125.9 168 40.5
TraesCS1D02G165100 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 4.6e-27 125.6 496 27.0
Spipo27G0015800 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 6.1e-27 125.2 361 29.1
AT5G05980 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 7.9e-27 124.8 346 29.2
Pp3c24_9100 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 7.9e-27 124.8 336 31.0
Pp3c23_670 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 1.0e-26 124.4 365 29.0
Potri.016G041800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 1.8e-26 123.6 373 28.7
AT3G55630 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 2.3e-26 123.2 486 27.8
Aco002379 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 3.0e-26 122.9 371 30.7
AT3G10160 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 3.0e-26 122.9 339 31.0
GSVIVG01033555001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 3.9e-26 122.5 442 27.6
Mapoly0010s0086 Marchantia polymorpha HOM04x5M002239 ORTHO04x5M002625 5.1e-26 122.1 343 29.7
Pgl_GLEAN_10021628 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 6.7e-26 121.7 355 29.9
Misin01G184500 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 6.7e-26 121.7 335 30.7
Bradi3g30210 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 2.5e-25 119.8 507 27.4
Sspon.01G0020910-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.3e-24 117.5 166 38.6
PEQU_09314 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 2.8e-24 116.3 349 28.4
Sspon.01G0000640-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.8e-23 113.6 155 38.7
evm.TU.AsparagusV1_05.14.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 6.9e-23 111.7 233 31.8
Oropetium_20150105_21336 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 1.3e-21 107.5 212 32.1
CALSI_Maker00013977 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 6.5e-21 105.1 236 30.1
LOC_Os10g35940 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 8.5e-21 104.8 494 26.1
Cre05.g239100 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 4.2e-20 102.4 188 33.0
Cre05.g239067 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 4.2e-20 102.4 188 33.0
Sspon.01G0020910-4D Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.2e-19 100.9 335 29.6
CALSI_Maker00015974 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 6.1e-19 98.6 397 28.7
PAB00049973 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.0e-18 97.8 82 68.3
Solyc04g016550.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 1.4e-18 97.4 326 28.5
Sspon.01G0020910-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 5.1e-18 95.5 320 28.4
PAB00036996 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.1e-17 94.4 86 55.8
MisinT096700 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.5e-17 94.0 69 62.3
Sobic.001G201900 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 2.2e-16 90.1 501 25.1
CALSI_Maker00006600 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 2.8e-16 89.7 59 64.4
Zm00001d048514 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 5.9e-14 82.0 493 25.4
gene35885 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.2e-13 80.1 72 52.8
CALSI_Maker00045140 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.9e-12 77.0 156 32.1
MisinT096800 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 2.5e-12 76.6 69 55.1
HORVU1Hr1G045670 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 5.5e-12 75.5 256 28.9
Misin02G171600 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 5.5e-12 75.5 114 34.2
Zm00007a00051220 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 5.5e-12 75.5 133 32.3
PAB00032154 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.2e-11 74.3 67 55.2
Zm00007a00051487 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 2.1e-11 73.6 112 33.9
Zm00001d032529 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 3.6e-11 72.8 112 33.9
Pgl_GLEAN_10037820 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 3.0e-10 69.7 240 29.2
PH01000012G0660 Phyllostachys edulis HOM04x5M002239 ORTHO04x5M002625 3.9e-10 69.3 195 28.2
PEQU_08658 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 1.7e-08 63.9 287 24.4
Zm00007a00051700 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 2.8e-08 63.2 130 29.2

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (9 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (8 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (3 genes)
Picea abies (4 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (10 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (8 genes)
Triticum turgidum (5 genes)
Vitis vinifera (3 genes)
Zea mays B73 (4 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (4 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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