Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
WBGene00000939	Caenorhabditis elegans	0.0	3974	1911	100.00
ENSMUSG00000041415	Mus musculus	5e-177	594	1069	36.01
ENSG00000100697	Homo sapiens	4e-175	589	1069	35.83
FBgn0039016	Drosophila melanogaster	2e-121	431	539	45.27
FBgn0034246	Drosophila melanogaster	8e-79	294	1073	26.37
ATR_00033G00650	Amborella trichopoda	2e-65	250	1107	25.38
AT5G20320	Arabidopsis thaliana	2e-63	244	1073	26.47
ATR_00016G03530	Amborella trichopoda	2e-61	237	680	30.59
OS03G38740	Oryza sativa	1e-55	218	699	29.18
OS03G02970	Oryza sativa	6e-54	213	861	25.90
PP00030G01470	Physcomitrella patens	3e-50	201	524	30.15
OS10G34430	Oryza sativa	5e-50	200	1073	24.42
ATR_00018G00030	Amborella trichopoda	5e-49	197	556	31.12
AT1G01040	Arabidopsis thaliana	6e-49	197	444	32.21
OS04G43050	Oryza sativa	1e-47	192	521	31.48
ATR_00026G00150	Amborella trichopoda	2e-47	191	531	30.13
AT3G03300	Arabidopsis thaliana	8e-46	186	512	30.66
SPCC188.13c	Schizosaccharomyces pombe	9e-46	186	692	28.61
OS01G68120	Oryza sativa	1e-41	172	540	29.26
AT3G43920	Arabidopsis thaliana	2e-40	169	543	27.81
PP00082G00590	Physcomitrella patens	8e-40	167	452	30.53
OS09G14610	Oryza sativa	2e-37	155	424	29.25
PP00149G00220	Physcomitrella patens	3e-35	152	344	32.27
DDB_G0291249	Dictyostelium discoideum	2e-33	146	549	27.50
DDB_G0289659	Dictyostelium discoideum	2e-33	146	547	27.42
AP00G48790	Auxenochlorella protothecoides	9e-30	134	217	39.63
AC00G50440	Asterochloris sp. Cgr-DA1pho v2.0	2e-29	132	338	30.18
PP00149G00210	Physcomitrella patens	1e-28	124	219	34.25
AC00G50450	Asterochloris sp. Cgr-DA1pho v2.0	2e-28	120	200	36.50
emh334790	Emiliania huxleyi	1e-27	126	581	25.65
ccr82040	Chondrus crispus	1e-26	124	355	29.01
PP00059G00270	Physcomitrella patens	2e-25	118	292	32.19
PP00196G00310	Physcomitrella patens	1e-23	110	259	31.27
OS06G25250	Oryza sativa	2e-22	105	305	28.52
WBGene00001090	Caenorhabditis elegans	3e-22	109	541	25.32
ccr166220	Chondrus crispus	4e-22	108	213	33.80
FC009G04820	Fragilariopsis cylindrus	2e-20	103	511	24.07
OS05G18850	Oryza sativa	3e-18	92.4	257	24.90
pte139590	Paramecium tetraurelia	6e-18	95.1	224	29.46
ENSG00000107201	Homo sapiens	8e-18	94.4	226	33.19
ES0039G00700	Ectocarpus siliculosus	1e-17	94.0	176	33.52
ATR_00007G02860	Amborella trichopoda	2e-17	89.7	270	27.41
ATR_00007G02840	Amborella trichopoda	1e-16	89.4	173	33.53
PP00082G00580	Physcomitrella patens	3e-16	85.9	173	33.53
FC009G06240	Fragilariopsis cylindrus	3e-16	89.7	461	24.08
CR02G13390	Chlamydomonas reinhardtii	4e-16	89.4	309	27.18
CNC64A_005G04280	Chlorella sp NC64A	2e-15	86.7	275	27.64
DDB_G0294407	Dictyostelium discoideum	3e-15	86.3	170	32.94
DDB_G0280963	Dictyostelium discoideum	6e-15	85.5	200	34.50
AT4G15417	Arabidopsis thaliana	9e-15	80.9	207	28.50
Naga_100010g67	Nannochloropsis gaditana	5e-14	82.4	171	33.92
AT3G20420	Arabidopsis thaliana	9e-14	79.3	265	25.28
pte363500	Paramecium tetraurelia	7e-13	78.6	220	29.55
OS11G07870	Oryza sativa	2e-12	76.6	514	24.71
CR16G12310	Chlamydomonas reinhardtii	1e-11	74.7	113	37.17
ENSMUSG00000017830	Mus musculus	2e-11	73.2	145	34.48
ENSG00000115267	Homo sapiens	6e-11	72.0	227	28.63
ES0095G00090	Ectocarpus siliculosus	2e-10	70.9	203	28.57
CNC64A_015G00970	Chlorella sp NC64A	6e-10	68.9	196	30.61
CR07G08010	Chlamydomonas reinhardtii	4e-09	66.6	127	32.28
phs96630	Phytophtora sojae	5e-09	65.9	187	24.60
OS01G37050	Oryza sativa	1e-08	62.0	169	28.40
ES0021G00720	Ectocarpus siliculosus	2e-08	63.9	182	30.77
WBGene00008400	Caenorhabditis elegans	2e-08	63.9	234	28.21
ES0021G00750	Ectocarpus siliculosus	2e-08	63.9	193	29.02
AT5G45150	Arabidopsis thaliana	3e-08	63.2	174	21.84
pte01400	Paramecium tetraurelia	7e-08	61.6	149	24.83
DDB_G0274841	Dictyostelium discoideum	9e-08	62.0	211	29.86
ENSG00000113360	Homo sapiens	1e-07	61.2	97	39.18
ENSMUSG00000022191	Mus musculus	1e-07	61.2	97	39.18
phs135900	Phytophtora sojae	2e-07	59.7	436	21.79
FC026G01920	Fragilariopsis cylindrus	3e-07	58.9	102	33.33
phs84680	Phytophtora sojae	3e-07	59.7	189	31.22
BPRRCC1105_04G02630	Bathycoccus prasinos	3e-07	60.1	214	30.37
FBgn0026722	Drosophila melanogaster	4e-07	59.7	100	37.00
PP00009G02310	Physcomitrella patens	5e-07	59.3	185	28.11
AC00G50430	Asterochloris sp. Cgr-DA1pho v2.0	6e-07	54.3	63	42.86
VC00G126830	Volvox carteri	1e-06	58.5	94	34.04
pte304000	Paramecium tetraurelia	1e-06	58.2	528	22.92
SPAC9.05	Schizosaccharomyces pombe	1e-06	57.8	140	30.71
PTI_09G04100	Phaeodactylum tricornutum	1e-06	57.8	82	37.80
CV00G55390	Coccomyxa subellipsoidea C-169	2e-06	54.7	209	25.84
ATR_00007G02850	Amborella trichopoda	2e-06	53.9	174	24.71
DDB_G0269192	Dictyostelium discoideum	3e-06	55.8	73	35.62
WBGene00022792	Caenorhabditis elegans	6e-06	55.5	128	31.25
WBGene00009163	Caenorhabditis elegans	6e-06	55.5	99	34.34

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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