Gene: AT1G01040 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G01040
Transcript Identifier
AT1G01040.2
Gene Type
Coding gene
Location
1 : 23519-31079 : positive

Family Information

Homologous gene family
HOM03P000904
(66 genes in 21 species)
specific family

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010098
IMP
Gene Ontologysuspensor development1
GO:0000910
IMP
Gene Ontologycytokinesis2 3
GO:0006396
ISS, RCA
Gene OntologyRNA processing4 5 6 7
GO:0035279
IMP
Gene OntologymRNA cleavage involved in gene silencing by miRNA8 9
GO:0031053
TAS
Gene Ontologyprimary miRNA processing10 11
GO:0010267
IMP
RCA
Gene Ontologyproduction of ta-siRNAs involved in RNA interference6 7 12 13
GO:0035196
IGI
RCA
Gene Ontologyproduction of miRNAs involved in gene silencing by miRNA6 7 14 15
GO:0009616
IMP
RCA
Gene Ontologyvirus induced gene silencing6 7 16 17
GO:0030422
IMP
Gene Ontologyproduction of siRNA involved in RNA interference18 19
GO:0010599
IMP
Gene Ontologyproduction of lsiRNA involved in RNA interference20 21
GO:2000034
IMP
Gene Ontologyregulation of seed maturation22 23
GO:0000226
RCA
Gene Ontologymicrotubule cytoskeleton organization6 7
GO:0000278
RCA
Gene Ontologymitotic cell cycle6 7
GO:0000911
RCA
Gene Ontologycytokinesis by cell plate formation6 7
GO:0006306
RCA
Gene OntologyDNA methylation6 7
GO:0006342
RCA
Gene Ontologychromatin silencing6 7
GO:0007267
RCA
Gene Ontologycell-cell signaling6 7
GO:0009630
RCA
Gene Ontologygravitropism6 7
GO:0010050
RCA
Gene Ontologyvegetative phase change6 7
GO:0016569
RCA
Gene Ontologycovalent chromatin modification6 7
GO:0031047
RCA
Gene Ontologygene silencing by RNA6 7
GO:0051607
RCA
Gene Ontologydefense response to virus6 7
GO:0009880
IMP
Gene Ontologyembryonic pattern specification24 25
GO:0009908
TAS
Gene Ontologyflower development24 25
GO:0010228
IMP
Gene Ontologyvegetative to reproductive phase transition of meristem24 25

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004525
ISS
Gene Ontologyribonuclease III activity26
GO:0008026
ISS
Gene OntologyATP-dependent helicase activity26
GO:0003725
IDA
Gene Ontologydouble-stranded RNA binding27 28
GO:0005515
IPI
Gene Ontologyprotein binding27 28 29 30 31 32

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
Gene Ontologynucleus27 28 33 34 35
GO:0010445
IDA
Gene Ontologynuclear dicing body36 37

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000999Ribonuclease III domain
IPR001650Helicase, C-terminal
IPR003100PAZ domain
IPR005034Dicer dimerisation domain
IPR006935Helicase/UvrB, N-terminal
IPR011907Ribonuclease III
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR014720Double-stranded RNA-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.