Gene: WBGene00000939 (Caenorhabditis elegans)

Overview top

Gene Identifier
WBGene00000939
Transcript Identifier
K12H4.8
Gene Type
Coding gene
Location
III : 8072110-8080274 : negative

Family Information

Homologous gene family
HOM03P000904
(66 genes in 21 species)
specific family
Orthologous gene family
ORTHO03P027247
(4 genes in 4 species)
specific family

Descriptions

Identifiers

Type Value
pidK12H4.8

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000003
IMP
Genome Projectreproduction
GO:0000737
IDA
Genome ProjectDNA catabolic process, endonucleolytic
GO:0002119
IMP
Genome Projectnematode larval development
GO:0006309
IGI
Genome Projectapoptotic DNA fragmentation
GO:0006396
IEA
Genome ProjectRNA processing
GO:0006401
IDA
Genome ProjectRNA catabolic process
GO:0008355
IMP
Genome Projectolfactory learning
GO:0016075
IEA
Genome ProjectrRNA catabolic process
GO:0030422
IMP
Genome Projectproduction of siRNA involved in RNA interference
GO:0031047
IEA
Genome Projectgene silencing by RNA
GO:0031050
IDA
Genome ProjectdsRNA fragmentation
GO:0031054
IMP
Genome Projectpre-miRNA processing
GO:0035262
IMP
Genome Projectgonad morphogenesis
GO:0040034
IMP
Genome Projectregulation of development, heterochronic
GO:0090501
IDA, IMP
IEA
Genome ProjectRNA phosphodiester bond hydrolysis
GO:0090502
IDA, IMP
IEA
Genome ProjectRNA phosphodiester bond hydrolysis, endonucleolytic
GO:2000636
IMP
Genome Projectpositive regulation of primary miRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
Genome Projectnucleotide binding
GO:0003677
IEA
Genome ProjectDNA binding
GO:0003723
IBA
IEA
Genome ProjectRNA binding
GO:0004386
IEA
Genome Projecthelicase activity
GO:0004518
IEA
Genome Projectnuclease activity
GO:0004519
IEA
Genome Projectendonuclease activity
GO:0004525
IDA, IMP
IEA
Genome Projectribonuclease III activity
GO:0004530
IDA
Genome Projectdeoxyribonuclease I activity
GO:0005524
IEA
Genome ProjectATP binding
GO:0016787
IEA
Genome Projecthydrolase activity
GO:0016891
IEA
Genome Projectendoribonuclease activity, producing 5'-phosphomonoesters
GO:0046872
IEA
Genome Projectmetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
IBA
Genome Projectnucleus
GO:0005737
IDA
IBA
Genome Projectcytoplasm
GO:0005829
IDA
Genome Projectcytosol
GO:0016442
IBA
Genome ProjectRISC complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000999Ribonuclease III domain
IPR001650Helicase, C-terminal
IPR003100PAZ domain
IPR005034Dicer dimerisation domain
IPR006935Helicase/UvrB, N-terminal
IPR011907Ribonuclease III
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR014720Double-stranded RNA-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.