Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ENSMUSG00000017830	Mus musculus	0.0	1412	679	100.00
ENSG00000115267	Homo sapiens	4e-172	526	717	41.28
ENSG00000107201	Homo sapiens	6e-99	331	693	33.48
WBGene00001090	Caenorhabditis elegans	2e-50	194	719	26.84
WBGene00008400	Caenorhabditis elegans	2e-45	178	698	24.21
SPCC188.13c	Schizosaccharomyces pombe	3e-29	129	502	26.69
OL07G03250	Ostreococcus lucimarinus	6e-24	110	545	25.50
ATR_00016G03530	Amborella trichopoda	8e-24	111	549	25.50
PP00009G02310	Physcomitrella patens	2e-22	107	500	26.20
PTI_14G01350	Phaeodactylum tricornutum	2e-22	107	520	25.00
gsu125320	Galdieria sulphuraria	3e-21	103	531	24.67
ATR_00033G00650	Amborella trichopoda	4e-21	103	514	23.93
SPAC9.05	Schizosaccharomyces pombe	1e-20	100	550	25.45
OT_07G03310	Ostreococcus tauri	1e-20	101	563	26.47
pte139590	Paramecium tetraurelia	6e-20	99.0	586	24.06
PP00030G01470	Physcomitrella patens	1e-19	98.2	173	39.31
PI00G18220	Picochlorum sp. SENEW3 (SE3)	5e-19	95.9	584	24.49
CM12G03130	Cyanidioschyzon merolae	6e-19	96.3	528	23.86
phs135900	Phytophtora sojae	8e-19	94.0	429	25.87
ATR_00018G00030	Amborella trichopoda	4e-18	93.6	160	38.75
OS03G02970	Oryza sativa	5e-18	93.2	174	38.51
AT1G01040	Arabidopsis thaliana	2e-17	91.3	174	36.78
DDB_G0274841	Dictyostelium discoideum	2e-17	91.3	535	23.36
AA0004G00300	Aureococcus anophagefferens	6e-17	88.6	516	25.58
ES0021G00750	Ectocarpus siliculosus	8e-16	85.9	178	29.78
ATR_00026G00150	Amborella trichopoda	1e-15	85.5	249	29.32
OS10G34430	Oryza sativa	4e-15	83.6	483	24.22
PP00149G00220	Physcomitrella patens	2e-14	81.6	89	43.82
ES0185G00040	Ectocarpus siliculosus	4e-14	80.5	533	23.45
AT3G03300	Arabidopsis thaliana	4e-14	80.5	91	42.86
AC00G50440	Asterochloris sp. Cgr-DA1pho v2.0	2e-13	78.2	119	40.34
PP00059G00270	Physcomitrella patens	2e-13	77.8	151	35.76
ATR_00064G00040	Amborella trichopoda	2e-13	78.2	177	31.64
AT5G20320	Arabidopsis thaliana	2e-13	78.2	134	37.31
ENSMUSG00000041415	Mus musculus	6e-13	76.6	145	38.62
ORCC809_07G03410	Ostreococcus sp RCC809	6e-13	76.6	172	32.56
MP04G06670	Micromonas pusilla strain CCMP1545	1e-12	75.9	589	22.75
OS04G43050	Oryza sativa	1e-12	75.9	157	33.12
SPAC20H4.04	Schizosaccharomyces pombe	1e-12	75.1	153	34.64
TP22G02800	Thalassiosira pseudonana	1e-12	71.6	141	33.33
ENSG00000100697	Homo sapiens	2e-12	75.1	145	37.24
OS11G07870	Oryza sativa	3e-12	74.7	143	33.57
CNC64A_005G04280	Chlorella sp NC64A	5e-12	73.9	123	37.40
ES0021G00720	Ectocarpus siliculosus	7e-12	72.8	120	35.00
WBGene00000939	Caenorhabditis elegans	7e-12	73.2	145	34.48
DDB_G0294407	Dictyostelium discoideum	1e-11	72.4	125	36.00
FBgn0038889	Drosophila melanogaster	2e-11	72.0	141	31.91
DDB_G0291249	Dictyostelium discoideum	3e-11	71.2	106	36.79
OM_06G03540	Ostreococcus mediterraneus	3e-11	71.2	174	31.03
DDB_G0289659	Dictyostelium discoideum	5e-11	70.5	106	36.79
RCC4223.01g07790	Picochlorum_RCC4223	5e-11	70.1	200	27.00
DDB_G0280963	Dictyostelium discoideum	8e-11	70.1	107	34.58
OS01G68120	Oryza sativa	1e-10	69.3	207	28.02
OS03G38740	Oryza sativa	2e-10	68.2	147	32.65
pte304000	Paramecium tetraurelia	3e-10	67.8	141	31.91
CNC64A_015G00970	Chlorella sp NC64A	3e-10	67.8	152	34.87
AP00G48790	Auxenochlorella protothecoides	4e-10	67.4	159	31.45
FBgn0034246	Drosophila melanogaster	4e-10	67.4	164	28.05
AT1G35530	Arabidopsis thaliana	6e-10	67.0	179	29.05
emh694630	Emiliania huxleyi	8e-10	65.5	123	34.15
emh539100	Emiliania huxleyi	9e-10	65.9	162	30.25
ENSMUSG00000055884	Mus musculus	1e-09	65.9	154	27.92
CNC64A_012G03600	Chlorella sp NC64A	2e-09	65.5	146	32.19
CR02G13390	Chlamydomonas reinhardtii	2e-09	65.5	174	32.76
CR08G03000	Chlamydomonas reinhardtii	2e-09	64.7	170	33.53
CR07G00220	Chlamydomonas reinhardtii	7e-09	63.2	136	34.56
emh162060	Emiliania huxleyi	7e-09	62.8	162	29.63
FC009G04820	Fragilariopsis cylindrus	1e-08	62.8	178	28.65
PP00082G00590	Physcomitrella patens	1e-08	62.8	184	28.80
TP01G01070	Thalassiosira pseudonana	2e-08	62.0	671	21.16
Naga_100010g67	Nannochloropsis gaditana	4e-08	60.8	141	30.50
YIR002C	Saccharomyces cerevisiae strain S288C	5e-08	60.5	114	33.33
CNC64A_001G05600	Chlorella sp NC64A	9e-08	59.7	180	29.44
pte363500	Paramecium tetraurelia	1e-07	59.7	146	30.82
FBgn0039016	Drosophila melanogaster	1e-07	59.3	72	38.89
FC022G02240	Fragilariopsis cylindrus	1e-07	58.5	206	28.64
ES0039G00700	Ectocarpus siliculosus	2e-07	58.9	189	28.57
CR05G02460	Chlamydomonas reinhardtii	3e-07	58.2	147	32.65
VC00G145030	Volvox carteri	6e-07	56.6	124	29.03
emh334790	Emiliania huxleyi	6e-07	57.0	169	29.59
BPRRCC1105_04G02630	Bathycoccus prasinos	9e-07	56.6	202	28.71
PP00149G00210	Physcomitrella patens	1e-06	55.1	184	26.63
CNC64A_004G03910	Chlorella sp NC64A	1e-06	54.7	108	36.11
DDB_G0293168	Dictyostelium discoideum	1e-06	55.8	158	32.28
ccr82040	Chondrus crispus	2e-06	55.5	177	29.38
OL05G02100	Ostreococcus lucimarinus	3e-06	53.9	126	31.75
PI00G12640	Picochlorum sp. SENEW3 (SE3)	4e-06	53.9	111	34.23
CR06G14880	Chlamydomonas reinhardtii	4e-06	53.9	124	29.03
emh217440	Emiliania huxleyi	4e-06	54.3	116	33.62
RCC4223.11g01240	Picochlorum_RCC4223	4e-06	53.9	109	34.86
CR12G04520	Chlamydomonas reinhardtii	4e-06	53.5	108	33.33
ccr188500	Chondrus crispus	5e-06	53.9	134	32.09
AP00G50040	Auxenochlorella protothecoides	9e-06	53.1	248	27.42
AT3G22310	Arabidopsis thaliana	9e-06	52.8	126	31.75
ccr189580	Chondrus crispus	1e-05	53.1	74	39.19

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment