Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO455G0134 Papaver somniferum HOM05D002341 ORTHO05D003165 4.4e-62 241.1 122 100.0
PSO455G0191 Papaver somniferum HOM05D002341 ORTHO05D003165 4.4e-62 241.1 122 100.0
PSO455G0257 Papaver somniferum HOM05D002341 ORTHO05D003165 4.4e-62 241.1 122 100.0
PSO455G0285 Papaver somniferum HOM05D002341 ORTHO05D003165 4.4e-62 241.1 122 100.0
PSO017G1385 Papaver somniferum HOM05D002341 ORTHO05D003165 1.1e-31 140.2 98 75.5
PSO170G3007 Papaver somniferum HOM05D002341 ORTHO05D003165 1.1e-31 140.2 98 75.5
Aqoxy3G03781 Aquilegia oxysepala HOM05D002341 ORTHO05D003165 1.8e-31 139.4 98 73.5
CSS0044190 Camellia sinensis var. sinensis HOM05D002341 ORTHO05D003165 1.8e-31 139.4 99 72.7
Atru.chr1.2928 Acer truncatum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Actinidia15757 Actinidia chinensis HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Aa31LG3G3350 Aethionema arabicum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Ah.01g020550 Amaranthus hybridus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
ATR0800G142 Amborella trichopoda HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
AagrBONN_evm.TU.Sc2ySwM_362.189 Anthoceros agrestis HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
AL2G41470 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
AT1G80070 Arabidopsis thaliana HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
arahy.Tifrunner.gnm1.ann1.B7D93H Arachis hypogaea HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
arahy.Tifrunner.gnm1.ann1.DCJ864 Arachis hypogaea HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
MSTRG.4705 Avicennia marina HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
MSTRG.9422 Avicennia marina HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
EL10Ac9g21877 Beta vulgaris HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
CANSAT56G2164 Cannabis sativa HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Carub.0002s2745 Capsella rubella HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
CAN.G147.16 Capsicum annuum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
CARHR074430 Cardamine hirsuta HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Cfa001956 Carpinus fangiana HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
CiPaw.01G248600 Carya illinoinensis HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
CDE02G0999 Ceratophyllum demersum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
CDE09G0407 Ceratophyllum demersum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
AUR62011512 Chenopodium quinoa HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
AUR62016331 Chenopodium quinoa HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Ca_01053_v3 Cicer arietinum L. HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
ClCG09G002950 Citrullus lanatus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Ciclev10024683m.g Citrus clementina HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Cc00_g08660 Coffea canephora HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
COL.COLO4_11940 Corchorus olitorius HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Haze_16566 Corylus avellana HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
MELO3C023427.2 Cucumis melo HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
CsaV3_7G032320 Cucumis sativus L. HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
DCAR_025515 Daucus carota HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Dinv30609 Davidia involucrata HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Dinv38126 Davidia involucrata HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Duzib160G0553 Durio zibethinus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Duzib235G1417 Durio zibethinus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Migut.D01080 Erythranthe guttata HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Eucgr.F03879 Eucalyptus grandis HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Thhalv10017992m.g Eutrema salsugineum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
FvH4_6g29610 Fragaria vesca HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
FAN02G2239 Fragaria x ananassa HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
FAN05G3465 Fragaria x ananassa HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
FAN09G3038 Fragaria x ananassa HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
FAN14G4930 Fragaria x ananassa HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Glyma.13G366100 Glycine max HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Glyma.15G007100 Glycine max HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Gohir.A05G122851 Gossypium hirsutum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Gohir.A10G073101 Gossypium hirsutum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Gohir.D05G123700 Gossypium hirsutum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Gohir.D10G077825 Gossypium hirsutum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Gorai.009G127700 Gossypium raimondii HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Gorai.011G084400 Gossypium raimondii HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Hma1.2p1_0017F.1_g011180 Hydrangea macrophylla HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Lj9C499G5 Lonicera japonica HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Lj3g0016754 Lotus japonicus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Lalb_Chr14g0373851 Lupinus albus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Lalb_Chr24g0395471 Lupinus albus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
MD00G1072300 Malus domestica HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
MD17G1212800 Malus domestica HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Manes.04G112400 Manihot esculenta HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Manes.11G057400 Manihot esculenta HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Mapoly0019s0008 Marchantia polymorpha HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Medtr2g103960 Medicago truncatula HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Medtr8g011150 Medicago truncatula HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Nn2g12097 Nelumbo nucifera HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Nn8g39518 Nelumbo nucifera HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Nitab4.5_0000366g0200 Nicotiana tabacum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Nitab4.5_0002890g0050 Nicotiana tabacum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Oeu005942.1 Olea europaea HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Oeu045135.1 Olea europaea HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Peaxi162Scf00089g00635 Petunia axillaris HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Peaxi162Scf01838g00019 Petunia axillaris HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Phvul.005G178600 Phaseolus vulgaris HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Pp3c24_20910 Physcomitrium patens HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Pp3c8_25090 Physcomitrium patens HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Psat5g302520 Pisum sativum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Prupe.3G088200 Prunus persica HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
PGR102G3099 Punica granatum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
QL05p031390 Quercus lobata HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Rhsim08G0212600 Rhododendron simsii HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
RcHm_v2.0_Chr2g0135211 Rosa chinensis HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
SalBow6G3017 Salvia bowleyana HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
SalBow6G5900 Salvia bowleyana HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Sp5g35830 Schrenkiella parvula HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Sed0003553 Sechium edule HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Sed0021407 Sechium edule HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
SMO145G0262 Selaginella moellendorffii HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Hund00514 Selenicereus undatus HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
SEGI_03160 Sequoiadendron giganteum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
SEGI_15815 Sequoiadendron giganteum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Sc10g0008090 Simmondsia chinensis HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Solyc07g008880.3 Solanum lycopersicum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Sopen07g004810 Solanum pennellii HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
PGSC0003DMG400028736 Solanum tuberosum HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
SGA_v2.0_scaffold26G11346 Striga asiatica HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
THA.LOC104800410 Tarenaya hassleriana HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
THA.LOC104812513 Tarenaya hassleriana HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
Thecc.06G025500 Theobroma cacao HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
TPR.G37161 Trifolium pratense HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
TWI75G1620 Tripterygium wilfordii HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
TAR383G0801 Trochodendron aralioides HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
TAR383G0916 Trochodendron aralioides HOM05D000467 ORTHO05D000379 3.1e-31 138.7 98 73.5
TAR625G0212 Trochodendron aralioides HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
vmacro19000 Vaccinium macrocarpon HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
VMungo1080G1733 Vigna mungo HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
GSVIVG01017346001 Vitis vinifera HOM05D002341 ORTHO05D003165 3.1e-31 138.7 98 73.5
AL7G10650 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BcaB06g28420 Brassica carinata HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BcaB06g28506 Brassica carinata HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BcaC09g51361 Brassica carinata HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BcaNung01746 Brassica carinata HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
A01p11740 Brassica napus HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
A04p23900 Brassica napus HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
C01p13930 Brassica napus HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
C04p60540 Brassica napus HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BolC1t01360H Brassica oleracea HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BolC4t27552H Brassica oleracea HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BraA01t01116Z Brassica rapa HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
BraA04t17913Z Brassica rapa HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
CBR_g48660 Chara braunii HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
Eucgr.F03935 Eucalyptus grandis HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
TPR.G24585 Trifolium pratense HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
unitig_747.g21298 Utricularia gibba HOM05D002341 ORTHO05D003165 4.0e-31 138.3 98 72.4
COL.COLO4_24410 Corchorus olitorius HOM05D002341 ORTHO05D003165 5.2e-31 137.9 98 73.5
Potri.003G031900 Populus trichocarpa HOM05D002341 ORTHO05D003165 6.8e-31 137.5 98 72.4
Sabra03G0018200 Salix brachista HOM05D002341 ORTHO05D003165 6.8e-31 137.5 98 72.4
Zm00001eb271550 Zea mays HOM05D002341 ORTHO05D003165 6.8e-31 137.5 98 72.4
Zm00001eb375530 Zea mays HOM05D002341 ORTHO05D003165 6.8e-31 137.5 98 72.4
AT4G38780 Arabidopsis thaliana HOM05D002341 ORTHO05D003165 8.9e-31 137.1 98 71.4
ECA247G2936 Erigeron canadensis HOM05D002341 ORTHO05D003165 8.9e-31 137.1 98 72.4
HanXRQChr04g0097891 Helianthus annuus HOM05D002341 ORTHO05D003165 8.9e-31 137.1 98 72.4
Lsat_1_v5_gn_1_34320 Lactuca sativa HOM05D002341 ORTHO05D003165 8.9e-31 137.1 98 72.4
MCO02G483 Micromonas commoda HOM05D002341 ORTHO05D003165 8.9e-31 137.1 98 71.4
A05p07330 Brassica napus HOM05D002341 ORTHO05D003165 1.2e-30 136.7 98 72.4
BraA05t19698Z Brassica rapa HOM05D002341 ORTHO05D003165 1.2e-30 136.7 98 72.4
DCAR_022311 Daucus carota HOM05D002341 ORTHO05D003165 1.2e-30 136.7 98 71.4
Cc01_g01870 Coffea canephora HOM05D002341 ORTHO05D003165 2.0e-30 136.0 98 72.4
HanXRQChr02g0033481 Helianthus annuus HOM05D002341 ORTHO05D003165 2.0e-30 136.0 98 71.4
RcHm_v2.0_Chr2g0160631 Rosa chinensis HOM05D002341 ORTHO05D003165 2.0e-30 136.0 98 71.4
Medtr2g093510 Medicago truncatula HOM05D002341 ORTHO05D003165 2.6e-30 135.6 98 72.4
BcaB02g09158 Brassica carinata HOM05D002341 ORTHO05D003165 4.4e-30 134.8 98 70.4
SHI11229 Sapria himalayana HOM05D002341 ORTHO05D003165 4.4e-30 134.8 98 70.4
BcaC02g12021 Brassica carinata HOM05D002341 ORTHO05D003165 5.8e-30 134.4 98 71.4
C04p08780 Brassica napus HOM05D002341 ORTHO05D003165 5.8e-30 134.4 98 71.4
BolC4t22470H Brassica oleracea HOM05D002341 ORTHO05D003165 5.8e-30 134.4 98 71.4
Zm00001eb337780 Zea mays HOM05D002341 ORTHO05D003165 5.8e-30 134.4 98 70.4
Haze_26409 Corylus avellana HOM05D002341 ORTHO05D003165 9.9e-30 133.7 98 67.3
vmacro07672 Vaccinium macrocarpon HOM05D002341 ORTHO05D003165 9.9e-30 133.7 98 70.4
BcaC05g27955 Brassica carinata HOM05D002341 ORTHO05D003165 2.2e-29 132.5 98 70.4
ECA246G5065 Erigeron canadensis HOM05D002341 ORTHO05D003165 2.9e-29 132.1 98 70.4
FAN02G2298 Fragaria x ananassa HOM05D002341 ORTHO05D003165 4.9e-29 131.3 98 67.3
SGA_v2.0_scaffold332G48966 Striga asiatica HOM05D002341 ORTHO05D003165 1.1e-28 130.2 94 70.2
Cre01.g016050 Chlamydomonas reinhardtii HOM05D002341 ORTHO05D003165 2.4e-28 129.0 98 67.3
FvH4_6g43880 Fragaria vesca HOM05D002341 ORTHO05D003165 5.4e-28 127.9 96 67.7
FAN14G1989 Fragaria x ananassa HOM05D002341 ORTHO05D003165 5.4e-28 127.9 98 66.3
FAN05G4314 Fragaria x ananassa HOM05D002341 ORTHO05D003165 2.1e-27 125.9 98 66.3
Cfa023699 Carpinus fangiana HOM05D002341 ORTHO05D003165 3.5e-27 125.2 98 62.2
PRCOL_00001855 Prasinoderma coloniale HOM05D002341 ORTHO05D003165 4.6e-27 124.8 98 62.2
Thhalv10024184m.g Eutrema salsugineum HOM05D002341 ORTHO05D003165 6.0e-27 124.4 98 64.3
Aqoxy3G02657 Aquilegia oxysepala HOM05D002341 ORTHO05D003165 7.8e-27 124.0 98 64.3
Prupe.3G223400 Prunus persica HOM05D002341 ORTHO05D003165 1.0e-26 123.6 98 66.3
BcaC02g12020 Brassica carinata HOM05D002341 ORTHO05D003165 5.1e-26 121.3 101 67.3
Carub.0007s2659 Capsella rubella HOM05D002341 ORTHO05D003165 5.1e-26 121.3 98 64.3
BraA05t19697Z Brassica rapa HOM05D002341 ORTHO05D003165 6.6e-26 120.9 98 65.3
AL7G40190 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 8.7e-26 120.6 98 64.3
BolC4t22469H Brassica oleracea HOM05D002341 ORTHO05D003165 1.9e-25 119.4 98 64.3
A05p07320 Brassica napus HOM05D002341 ORTHO05D003165 2.5e-25 119.0 98 65.3
C05p39600 Brassica napus HOM05D002341 ORTHO05D003165 4.3e-25 118.2 73 80.8
CARHR222120 Cardamine hirsuta HOM05D002341 ORTHO05D003165 5.6e-25 117.9 98 59.2
vmacro02726 Vaccinium macrocarpon HOM05D002341 ORTHO05D003165 9.6e-25 117.1 70 80.0
Lalb_Chr04g0249401 Lupinus albus HOM05D002341 ORTHO05D003165 3.6e-24 115.2 98 61.2
Prupe.7G079800 Prunus persica HOM05D002341 ORTHO05D003165 5.3e-23 111.3 110 61.8
BcaB02g09159 Brassica carinata HOM05D002341 ORTHO05D003165 1.4e-20 103.2 91 57.1
Thhalv10025834m.g Eutrema salsugineum HOM05D002341 ORTHO05D003165 2.7e-19 99.0 104 54.8
FAN09G2021 Fragaria x ananassa HOM05D002341 ORTHO05D003165 3.5e-19 98.6 61 75.4
RcHm_v2.0_Chr2g0122691 Rosa chinensis HOM05D002341 ORTHO05D003165 3.5e-19 98.6 99 56.6
MD09G1102200 Malus domestica HOM05D002341 ORTHO05D003165 7.9e-19 97.4 78 64.1
HPP92_003044 Vanilla planifolia HOM05D002341 ORTHO05D003165 1.9e-17 92.8 73 68.5
COL.COLO4_00260 Corchorus olitorius HOM05D002341 ORTHO05D003165 2.4e-15 85.9 51 80.4
C04p08770 Brassica napus HOM05D002341 ORTHO05D003165 3.2e-12 75.5 98 48.0


User provided reference genes

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