Interactive Phylogenetics Module

Gene Id
p5.00_sc01729_p0001

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
p5.00_sc01729_p0001 Elaeis guineensis HOM04x5M007131 ORTHO04x5M008984 8.8e-149 528.9 256 100.0
Ma05_g28830 Musa acuminata HOM04x5M007131 ORTHO04x5M008984 8.1e-86 319.7 191 81.7
evm.TU.AsparagusV1_06.202.V1.1 Asparagus officinalis HOM04x5M007131 ORTHO04x5M008984 6.0e-81 303.5 190 79.5
Aco008453 Ananas comosus HOM04x5M007131 ORTHO04x5M008984 6.6e-80 300.1 188 76.1
ATR0752G046 Amborella trichopoda HOM04x5M007131 ORTHO04x5M008984 8.6e-80 299.7 183 77.6
Sobic.006G222700 Sorghum bicolor HOM04x5M007131 ORTHO04x5M008984 1.5e-79 298.9 191 74.3
GSVIVG01001999001 Vitis vinifera HOM04x5M007131 ORTHO04x5M008984 1.5e-79 298.9 189 75.7
Misin12G234100 Miscanthus sinensis HOM04x5M007131 ORTHO04x5M008984 5.6e-79 297.0 192 75.0
Sspon.05G0003190-2B Saccharum spontaneum HOM04x5M007131 ORTHO04x5M008984 5.6e-79 297.0 192 75.0
Sspon.05G0003190-4D Saccharum spontaneum HOM04x5M007131 ORTHO04x5M008984 5.6e-79 297.0 192 75.0
Sspon.05G0003190-3C Saccharum spontaneum HOM04x5M007131 ORTHO04x5M008984 1.6e-78 295.4 192 74.5
Sspon.05G0003190-1A Saccharum spontaneum HOM04x5M007131 ORTHO04x5M008984 8.1e-78 293.1 187 75.9
Seita.7G245800 Setaria italica HOM04x5M007131 ORTHO04x5M008984 3.1e-77 291.2 191 73.3
LOC_Os04g53490 Oryza sativa ssp. japonica HOM04x5M007131 ORTHO04x5M008984 4.0e-77 290.8 191 73.3
OB04G32890 Oryza brachyantha HOM04x5M007131 ORTHO04x5M008984 6.8e-77 290.0 191 74.3
Pgl_GLEAN_10027157 Cenchrus americanus HOM04x5M007131 ORTHO04x5M008984 3.4e-76 287.7 191 71.7
Zm00001d002240 Zea mays B73 HOM04x5M007131 ORTHO04x5M008984 1.7e-75 285.4 191 71.7
Zm00007a00023174 Zea mays B104 HOM04x5M007131 ORTHO04x5M008984 1.7e-75 285.4 191 71.7
Zm00008a006234 Zea mays PH207 HOM04x5M007131 ORTHO04x5M008984 1.7e-75 285.4 191 71.7
Bradi5g22510 Brachypodium distachyon HOM04x5M007131 ORTHO04x5M008984 3.8e-75 284.3 192 70.3
Solyc12g005180.1 Solanum lycopersicum HOM04x5M007131 ORTHO04x5M008984 8.4e-75 283.1 188 71.8
PH01001914G0170 Phyllostachys edulis HOM04x5M007131 ORTHO04x5M008984 5.4e-74 280.4 179 75.4
LP030787 Lolium perenne HOM04x5M007131 ORTHO04x5M008984 2.7e-73 278.1 193 68.9
Spipo14G0051300 Spirodela polyrhiza HOM04x5M007131 ORTHO04x5M008984 1.0e-72 276.2 178 71.3
Potri.001G420800 Populus trichocarpa HOM04x5M007131 ORTHO04x5M008984 1.3e-72 275.8 190 70.5
PAB00019132 Picea abies HOM04x5M007131 ORTHO04x5M008984 2.3e-72 275.0 179 68.7
TraesCS2B02G496600 Triticum aestivum HOM04x5M007131 ORTHO04x5M008984 6.6e-72 273.5 191 68.6
TRITD2Bv1G225350 Triticum turgidum HOM04x5M007131 ORTHO04x5M008984 6.6e-72 273.5 191 68.6
AT3G47860 Arabidopsis thaliana HOM04x5M007131 ORTHO04x5M008984 1.9e-71 271.9 192 69.3
TraesCS2A02G473600 Triticum aestivum HOM04x5M007131 ORTHO04x5M008984 2.1e-70 268.5 191 67.5
TRITD2Av1G262980 Triticum turgidum HOM04x5M007131 ORTHO04x5M008984 2.1e-70 268.5 191 67.5
TraesCS2D02G473300 Triticum aestivum HOM04x5M007131 ORTHO04x5M008984 8.1e-70 266.5 191 67.0
ASH_gene3554 Apostasia shenzhenica HOM04x5M007131 ORTHO04x5M008984 1.1e-69 266.2 183 68.3
OsR498G0409317800.01 Oryza sativa ssp. indica HOM04x5M007131 ORTHO04x5M008984 1.4e-69 265.8 141 85.1
HORVU2Hr1G106880 Hordeum vulgare HOM04x5M007131 ORTHO04x5M008984 3.2e-66 254.6 143 80.4
CALSI_Maker00019885 Calamus simplicifolius HOM04x5M007131 ORTHO04x5M008984 1.6e-65 252.3 181 71.3
Zosma54g00600 Zostera marina HOM04x5M007131 ORTHO04x5M008984 8.7e-64 246.5 191 61.3
Mapoly0115s0028 Marchantia polymorpha HOM04x5M007131 ORTHO04x5M008984 2.2e-59 231.9 197 54.3
gene13953 Selaginella moellendorffii HOM04x5M007131 ORTHO04x5M008984 3.8e-59 231.1 140 72.1
gene30656 Selaginella moellendorffii HOM04x5M007131 ORTHO04x5M008984 1.1e-58 229.6 138 72.5
Zjn_sc00004.1.g10580.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M007131 ORTHO04x5M008984 3.2e-58 228.0 183 63.9
Pp3c9_6110 Physcomitrium patens HOM04x5M007131 ORTHO04x5M008984 3.0e-56 221.5 192 54.7
Oropetium_20150105_01760 Oropetium thomaeum HOM04x5M007131 ORTHO04x5M008984 4.1e-37 157.9 87 81.6
Misin11G220300 Miscanthus sinensis HOM04x5M007131 ORTHO04x5M008984 1.7e-19 99.4 59 78.0

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings