Gene: LOC_Os04g53490 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os04g53490
Transcript Identifier
LOC_Os04g53490.1
Gene Type
Coding gene
Location
Chr4 : 31848579-31850732 : negative

Family Information

Homologous gene family
HOM04x5M007131
(44 genes in 36 species)
specific family
Orthologous gene family
ORTHO04x5M008984
(44 genes in 36 species)
specific family

Descriptions

Description
OsCHL Chloroplastic lipocalin, expressed

Identifiers

Type Value
idLOC_Os04g53490.MSUv7.0
pacid33112721
tidLOC_Os04g53490.1.MSUv7.0
tidLOC_Os04g53490.1
RAPOs04g0626400

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G47860
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G47860
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G47860
GO:0046322
ISO
PLAZA Integrative Orthologynegative regulation of fatty acid oxidation AT3G47860
GO:1901562
ISO
PLAZA Integrative Orthologyresponse to paraquat AT3G47860
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT3G47860
GO:0010117
ISO
PLAZA Integrative Orthologyphotoprotection AT3G47860
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT3G47860
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G47860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036094
IEA
InterProsmall molecule binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
RCA
Gene Ontologyplastid
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G47860
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT3G47860
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT3G47860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012674Calycin
IPR002345Lipocalin
IPR000566Lipocalin/cytosolic fatty-acid binding domain
IPR022272Lipocalin family conserved site

Mapman id Description
1.1.1.5.1.5Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).NPQ-regulatory lipocalin (LCNP)