Interactive Phylogenetics Module

Gene Id
Sspon.02G0025880-2B

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.02G0025880-2B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1223.8 653 100.0
Misin04G013100 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1203.3 653 96.9
Sobic.002G008900 Sorghum bicolor HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1161.4 659 93.9
Zm00007a00017366 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1158.7 652 91.0
Zm00007a00033969 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1115.5 653 88.2
OsR498G0713385700.01 Oryza sativa ssp. indica HOM04x5M003226 ORTHO04x5M004921 1.2e-282 974.9 654 80.4
TraesCS2B02G281600 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 1.2e-279 964.9 644 79.0
TraesCS2A02G260400 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 2.7e-279 963.8 644 78.9
TRITD2Av1G146870 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 7.9e-279 962.2 644 78.7
TraesCS2D02G263300 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 2.3e-278 960.7 644 78.6
TRITD2Bv1G129320 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 3.0e-278 960.3 644 78.7
Bradi1g59325 Brachypodium distachyon HOM04x5M003226 ORTHO04x5M004921 8.7e-278 958.7 647 77.1
LP030466 Lolium perenne HOM04x5M003226 ORTHO04x5M004921 5.5e-272 939.5 641 76.9
Seita.2G002900 Setaria italica HOM04x5M003226 ORTHO04x5M004921 5.1e-270 932.9 671 78.4
OB07G10690 Oryza brachyantha HOM04x5M003226 ORTHO04x5M004921 1.5e-261 904.8 597 78.9
Zm00008a010545 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 1.1e-259 898.7 591 80.9
Sspon.02G0043350-1B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 5.9e-258 892.9 667 77.2
Pgl_GLEAN_10010211 Cenchrus americanus HOM04x5M003226 ORTHO04x5M004921 5.3e-251 869.8 631 78.0
HORVU2Hr1G064000 Hordeum vulgare HOM04x5M003226 ORTHO04x5M004921 4.2e-248 860.1 576 78.6
PH01000549G0690 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 2.8e-244 847.4 684 67.3
PH01001640G0300 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 5.4e-243 843.2 588 75.5
Zjn_sc00162.1.g00390.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003226 ORTHO04x5M004921 3.3e-208 727.6 438 85.2
PH01001526G0360 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 5.4e-203 710.3 487 81.7
Aco017576 Ananas comosus HOM04x5M003226 ORTHO04x5M004921 6.4e-188 660.2 651 56.8
p5.00_sc00151_p0024 Elaeis guineensis HOM04x5M003226 ORTHO04x5M004921 1.9e-184 648.7 649 56.4
Ma05_g01420 Musa acuminata HOM04x5M003226 ORTHO04x5M004921 1.1e-163 579.7 654 51.4
evm.TU.AsparagusV1_03.2056.V1.1 Asparagus officinalis HOM04x5M003226 ORTHO04x5M004921 7.4e-160 567.0 641 49.9
GSVIVG01011514001 Vitis vinifera HOM04x5M003226 ORTHO04x5M004921 1.8e-158 562.4 653 50.2
Potri.017G092600 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 1.9e-147 525.8 655 48.5
CALSI_Maker00013263 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M004921 4.7e-146 521.2 582 51.5
ASH_gene7576 Apostasia shenzhenica HOM04x5M003226 ORTHO04x5M004921 6.3e-143 510.8 651 46.5
Zm00001d007943 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 6.3e-143 510.8 268 97.0
Spipo2G0087800 Spirodela polyrhiza HOM04x5M003226 ORTHO04x5M004921 1.1e-142 510.0 653 45.9
Zm00001d018657 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 1.2e-141 506.5 269 95.9
AT5G15540 Arabidopsis thaliana HOM04x5M003226 ORTHO04x5M004921 1.4e-137 493.0 668 44.9
Zosma159g00220 Zostera marina HOM04x5M003226 ORTHO04x5M004921 1.5e-131 473.0 643 44.9
PEQU_02399 Phalaenopsis equestris HOM04x5M003226 ORTHO04x5M004921 1.1e-123 446.8 438 54.6
Zm00008a026675 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 6.8e-121 437.6 269 85.1
Sspon.02G0025880-1A Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 5.4e-118 427.9 240 100.0
Solyc03g059420.2 Solanum lycopersicum HOM04x5M003226 ORTHO04x5M004921 2.8e-114 415.6 478 49.6
ATR0064G076 Amborella trichopoda HOM04x5M003226 ORTHO04x5M004921 3.2e-110 402.1 376 56.6
Sspon.01G0062950-1D Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 1.6e-98 363.2 227 85.5
Mapoly0011s0050 Marchantia polymorpha HOM04x5M003226 ORTHO04x5M004921 3.8e-87 325.5 683 34.8
gene23322 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 1.7e-84 316.6 656 34.9
gene10784 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 1.1e-83 313.9 658 35.0
Pp3c15_14600 Physcomitrium patens HOM04x5M003226 ORTHO04x5M004921 1.6e-82 310.1 659 34.1
PAB00017226 Picea abies HOM04x5M003226 ORTHO04x5M004921 2.9e-71 272.7 295 52.5
PAB00016463 Picea abies HOM04x5M003226 ORTHO04x5M004921 5.1e-68 261.9 301 49.8
Zm00001d026188 Zea mays B73 HOM04x5M003226 ORTHO04x5M011996 3.2e-62 242.7 160 80.0
Zm00007a00043263 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 9.3e-62 241.1 164 78.7
Zm00001d048114 Zea mays B73 HOM04x5M001316 ORTHO04x5M013885 3.9e-60 235.7 193 67.4
Zm00008a035868 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 4.3e-59 232.3 159 76.7
Sspon.02G0025880-3C Saccharum spontaneum HOM04x5M003226 ORTHO04x5M014305 2.8e-58 229.6 125 96.8
Zm00007a00006395 Zea mays B104 HOM04x5M001316 ORTHO04x5M013885 2.3e-44 183.3 132 75.8
Zm00001d037074 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 1.2e-40 171.0 106 86.8
Zm00007a00001952 Zea mays B104 HOM04x5M001316 ORTHO04x5M013885 3.8e-39 166.0 132 67.4
Oropetium_20150105_21970 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 1.4e-36 157.5 99 81.8
Oropetium_20150105_22008 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 2.0e-35 153.7 169 51.5
Zm00001d018970 Zea mays B73 HOM04x5M001316 ORTHO04x5M013885 1.6e-29 134.0 77 85.7
Zm00008a033869 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 2.7e-29 133.3 79 83.5
Zm00008a017002 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 2.7e-29 133.3 79 83.5
Cre06.g278269 Chlamydomonas reinhardtii HOM04x5M003226 ORTHO04x5M004921 1.7e-23 114.0 344 28.2
CALSI_Maker00024933 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M013885 1.6e-21 107.5 176 38.6
Zm00001d035106 Zea mays B73 HOM04x5M003226 ORTHO04x5M011996 6.1e-21 105.5 55 92.7
Zm00001d046771 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 1.7e-18 97.4 67 82.1
Zm00008a025706 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 7.0e-17 92.0 52 88.5
Potri.004G119300 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 1.9e-14 84.0 83 53.0
CALSI_Maker00013268 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M014305 1.4e-12 77.8 115 40.9
Zm00001d030351 Zea mays B73 HOM04x5M013681 ORTHO04x5M019675 2.2e-10 70.5 78 55.1
CALSI_Maker00024936 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M014305 1.3e-07 61.2 98 39.8
Zm00001d037077 Zea mays B73 HOM04x5M000142 ORTHO04x5M000108 8.6e-07 58.5 33 90.9

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (1 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (0 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (10 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (6 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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