Interactive Phylogenetics Module

Gene Id
Solyc08g036610.1

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g036610.1 Solanum lycopersicum HOM04x5M001278 ORTHO04x5M027771 4.9e-53 209.5 106 100.0
Solyc00g007600.1 Solanum lycopersicum HOM04x5M001278 ORTHO04x5M027771 1.9e-41 171.0 88 97.7
Solyc09g082790.2 Solanum lycopersicum HOM04x5M001278 ORTHO04x5M001342 1.3e-13 78.6 116 44.8
GSVIVG01018051001 Vitis vinifera HOM04x5M001278 ORTHO04x5M001342 1.3e-13 78.6 115 45.2
Aco004237 Ananas comosus HOM04x5M001278 ORTHO04x5M001342 6.4e-13 76.3 96 46.9
ASH_gene5851 Apostasia shenzhenica HOM04x5M001278 ORTHO04x5M001342 1.9e-12 74.7 109 44.0
Potri.008G158500 Populus trichocarpa HOM04x5M001278 ORTHO04x5M001342 2.4e-12 74.3 116 42.2
AT3G22880 Arabidopsis thaliana HOM04x5M001278 ORTHO04x5M001342 3.2e-12 73.9 118 43.2
PEQU_23377 Phalaenopsis equestris HOM04x5M001278 ORTHO04x5M001342 3.2e-12 73.9 109 44.0
evm.TU.AsparagusV1_03.2906.V1.1 Asparagus officinalis HOM04x5M001278 ORTHO04x5M001342 7.1e-12 72.8 109 43.1
Sobic.004G107000 Sorghum bicolor HOM04x5M001278 ORTHO04x5M001342 7.1e-12 72.8 116 41.4
Sspon.04G0014370-1A Saccharum spontaneum HOM04x5M001278 ORTHO04x5M000660 7.1e-12 72.8 115 41.7
Misin15G001800 Miscanthus sinensis HOM04x5M001278 ORTHO04x5M001342 9.3e-12 72.4 115 41.7
Misin15G024700 Miscanthus sinensis HOM04x5M001278 ORTHO04x5M001342 9.3e-12 72.4 115 41.7
PH01000474G0210 Phyllostachys edulis HOM04x5M001278 ORTHO04x5M001342 9.3e-12 72.4 115 41.7
Sobic.008G010900 Sorghum bicolor HOM04x5M001278 ORTHO04x5M001342 9.3e-12 72.4 115 41.7
Zosma107g00140 Zostera marina HOM04x5M001278 ORTHO04x5M001342 9.3e-12 72.4 109 43.1
ATR0665G613 Amborella trichopoda HOM04x5M001278 ORTHO04x5M001342 1.2e-11 72.0 109 43.1
Zjn_sc00028.1.g02140.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M001278 ORTHO04x5M001342 1.2e-11 72.0 109 43.1
Bradi4g42957 Brachypodium distachyon HOM04x5M001278 ORTHO04x5M001342 1.6e-11 71.6 109 43.1
Pgl_GLEAN_10015057 Cenchrus americanus HOM04x5M001278 ORTHO04x5M001342 1.6e-11 71.6 109 43.1
Pgl_GLEAN_10013825 Cenchrus americanus HOM04x5M001278 ORTHO04x5M001342 1.6e-11 71.6 109 43.1
Seita.7G322200 Setaria italica HOM04x5M001278 ORTHO04x5M001342 1.6e-11 71.6 109 43.1
Misin08G101800 Miscanthus sinensis HOM04x5M001278 ORTHO04x5M001342 2.1e-11 71.2 113 41.6
Potri.010G081500 Populus trichocarpa HOM04x5M001278 ORTHO04x5M001342 2.1e-11 71.2 111 42.3
Spipo2G0019600 Spirodela polyrhiza HOM04x5M001278 ORTHO04x5M001342 2.1e-11 71.2 116 39.7
OB11G12300 Oryza brachyantha HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
LOC_Os11g04954 Oryza sativa ssp. japonica HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
LOC_Os12g04980 Oryza sativa ssp. japonica HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
Pp3c20_7190 Physcomitrium patens HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 119 40.3
TraesCS5D02G141200 Triticum aestivum HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
TraesCS5A02G133000 Triticum aestivum HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
TraesCS5B02G131900 Triticum aestivum HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
TRITD5Av1G101960 Triticum turgidum HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
TRITD5Bv1G082900 Triticum turgidum HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 109 43.1
Zm00001d044629 Zea mays B73 HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 125 40.0
Zm00007a00025167 Zea mays B104 HOM04x5M001278 ORTHO04x5M001342 2.7e-11 70.9 125 40.0
HORVU5Hr1G040730 Hordeum vulgare HOM04x5M001278 ORTHO04x5M001342 3.5e-11 70.5 109 42.2
Misin14G014300 Miscanthus sinensis HOM04x5M001278 ORTHO04x5M001342 3.5e-11 70.5 107 43.0
OsR498G1119407800.01 Oryza sativa ssp. indica HOM04x5M001278 ORTHO04x5M001342 7.9e-11 69.3 107 43.0
Ma08_g27560 Musa acuminata HOM04x5M001278 ORTHO04x5M001342 1.0e-10 68.9 117 39.3
p5.00_sc00074_p0014 Elaeis guineensis HOM04x5M001278 ORTHO04x5M001342 1.3e-10 68.6 109 41.3
gene18117 Selaginella moellendorffii HOM04x5M001278 ORTHO04x5M001342 8.7e-10 65.9 138 37.7
gene14487 Selaginella moellendorffii HOM04x5M001278 ORTHO04x5M001342 1.5e-09 65.1 109 40.4
Oropetium_20150105_14596 Oropetium thomaeum HOM04x5M001278 ORTHO04x5M001342 1.9e-09 64.7 104 41.3
PH01001593G0470 Phyllostachys edulis HOM04x5M001278 ORTHO04x5M001342 2.5e-09 64.3 104 41.3
Mapoly0110s0049 Marchantia polymorpha HOM04x5M001278 ORTHO04x5M001342 3.3e-09 63.9 109 37.6
Mapoly0108s0001 Marchantia polymorpha HOM04x5M001278 ORTHO04x5M001342 3.3e-09 63.9 109 37.6
Misin07G100200 Miscanthus sinensis HOM04x5M001278 ORTHO04x5M015805 3.3e-09 63.9 65 47.7
Zm00008a028828 Zea mays PH207 HOM04x5M001278 ORTHO04x5M001342 3.3e-09 63.9 102 41.2
Oropetium_20150105_15080 Oropetium thomaeum HOM04x5M001278 ORTHO04x5M001342 4.3e-09 63.5 104 40.4
Seita.8G027900 Setaria italica HOM04x5M001278 ORTHO04x5M015805 5.6e-09 63.2 39 71.8
OsR498G1220924800.01 Oryza sativa ssp. indica HOM04x5M001278 ORTHO04x5M015805 1.3e-08 62.0 36 77.8
CALSI_Maker00017146 Calamus simplicifolius HOM04x5M001278 ORTHO04x5M015805 1.6e-08 61.6 36 75.0
CALSI_Maker00028217 Calamus simplicifolius HOM04x5M001278 ORTHO04x5M001342 1.6e-08 61.6 36 75.0
CALSI_Maker00038868 Calamus simplicifolius HOM04x5M001278 ORTHO04x5M015805 3.1e-07 57.4 36 69.4
Sspon.04G0014370-1P Saccharum spontaneum HOM04x5M001278 ORTHO04x5M001342 5.3e-07 56.6 31 80.6
Sspon.04G0014370-3D Saccharum spontaneum HOM04x5M001278 ORTHO04x5M001342 5.3e-07 56.6 31 80.6
Zm00008a014759 Zea mays PH207 HOM04x5M001278 ORTHO04x5M001342 4.5e-06 53.5 121 33.9
CALSI_Maker00038719 Calamus simplicifolius HOM04x5M001278 ORTHO04x5M015805 7.6e-06 52.8 31 74.2

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (0 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (1 genes)
Picea abies (0 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings